RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SLC25A12O75746 678 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 ZFPL1O95159 310 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 SRMP19623 302 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 SLC6A1P30531 599 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 GRPRP30550 384 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 RNF4P78317 190 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 ACY1Q03154 408 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 GPR176Q14439 515 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 TATDN3Q17R31 274 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 C5orf46Q6UWT4 87 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 ZNF574Q6ZN55 896 aaPredicted RBP15.2■□□□□ 0.02
NUP50-202ENST00000396096 GRINAQ7Z429 371 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 STT3BQ8TCJ2 826 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 STK35Q8TDR2 534 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 CREB3L1Q96BA8 519 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 UPRTQ96BW1 309 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 KLHL15Q96M94 604 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 DERL3Q96Q80 235 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 WDR76Q9H967 626 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 TEKT2Q9UIF3 430 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 PPIEQ9UNP9 301 aaKnown RBP15.2■□□□□ 0.02
NUP50-202ENST00000396096 TMED7Q9Y3B3 224 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 CPAMD8Q8IZJ3 1885 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 A8MVM7 634 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 PHYHO14832 338 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 SUSD5O60279 629 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 NUDT14O95848 222 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 SNRPBP14678 240 aaKnown RBP15.2■□□□□ 0.02
NUP50-202ENST00000396096 EPHA8P29322 1005 aaPredicted RBP15.2■□□□□ 0.02
NUP50-202ENST00000396096 MMP15P51511 669 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 PITPNAQ00169 270 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 EGR3Q06889 387 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 ALKBH1Q13686 389 aaKnown RBP15.2■□□□□ 0.02
NUP50-202ENST00000396096 EFR3AQ14156 821 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 ZFP69Q49AA0 526 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 FAM69AQ5T7M9 428 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 C1QL3Q5VWW1 255 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 TMPRSS9Q7Z410 1059 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 SYT9Q86SS6 491 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 GLCCI1Q86VQ1 547 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 ADGRG3Q86Y34 549 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 NFAM1Q8NET5 270 aaPredicted RBP15.2■□□□□ 0.02
NUP50-202ENST00000396096 ADAMTS14Q8WXS8 1223 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 DUSP23Q9BVJ7 150 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 NUFIP1Q9UHK0 495 aaKnown RBP15.2■□□□□ 0.02
NUP50-202ENST00000396096 AK6Q9Y3D8 172 aaKnown RBP15.2■□□□□ 0.02
NUP50-202ENST00000396096 PCDHGA9Q9Y5G4 932 aaKnown RBP15.2■□□□□ 0.02
NUP50-202ENST00000396096 TMEM14AQ9Y6G1 99 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 H7C1C5 153 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 KHNYNO15037 678 aaKnown RBP15.19■□□□□ 0.02
NUP50-202ENST00000396096 SCO2O43819 266 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 ORC5O43913 435 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 DXOO77932 396 aaKnown RBP15.19■□□□□ 0.02
NUP50-202ENST00000396096 IGHMP01871 453 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 OR8G3PP0DMU2 310 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 PRKCAP17252 672 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 ALOX5APP20292 161 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 SLC26A5P58743 744 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 BTG1P62324 171 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 LCN6P62502 163 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 PLA1AQ53H76 456 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 LIPNQ5VXI9 398 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 ANKRD37Q7Z713 158 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 OR4D9Q8NGE8 314 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 OR6S1Q8NH40 331 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 ZNF519Q8TB69 540 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 GFI1Q99684 422 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 IER2Q9BTL4 223 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 BRD7Q9NPI1 651 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 TAS2R10Q9NYW0 307 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 CAMK2AQ9UQM7 478 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 ALG5Q9Y673 324 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 FKBP7Q9Y680 259 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 TNRC6BQ9UPQ9 1833 aaKnown RBP15.19■□□□□ 0.02
NUP50-202ENST00000396096 PCNX3Q9H6A9 2034 aa15.19■□□□□ 0.02
NUP50-202ENST00000396096 TRBV5-5A0A0J9YX44 114 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 RGS13O14921 159 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 CTDSPLO15194 276 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 GSTZ1O43708 216 aaPredicted RBP15.18■□□□□ 0.02
NUP50-202ENST00000396096 GMFGO60234 142 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 ITGA10O75578 1167 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 AKR7A3O95154 331 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 WISP1O95388 367 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 ONECUT2O95948 504 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 CENPAP49450 140 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 AGFG1P52594 562 aaKnown RBP15.18■□□□□ 0.02
NUP50-202ENST00000396096 IFITM2Q01629 132 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 BCL2A1Q16548 175 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 UBE2NLQ5JXB2 153 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 C1orf140Q5VVS0 124 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 YIPF7Q8N8F6 280 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 APCDD1LQ8NCL9 501 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 UBASH3BQ8TF42 649 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 INTS14Q96SY0 518 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 MRI1Q9BV20 369 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 SYT4Q9H2B2 425 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 ANKRD10Q9NXR5 420 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 LAMP5Q9UJQ1 280 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 CACNA1EQ15878 2313 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 LY6G6EA0A0G2JKS1 128 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms