RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 CTNSO60931 367 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 SBK2P0C263 348 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 OR8U8P0C7N1 319 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 PPT1P50897 306 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 RIDAP52758 137 aaKnown RBP17.26■□□□□ 0.35
HOXC6-202ENST00000394331 TAS2R20P59543 309 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 GTPBP8Q8N3Z3 284 aaPredicted RBP17.26■□□□□ 0.35
HOXC6-202ENST00000394331 BOLLQ8N9W6 283 aaKnown RBP17.26■□□□□ 0.35
HOXC6-202ENST00000394331 OR4C16Q8NGL9 310 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 OR5M8Q8NGP6 311 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 MIB2Q96AX9 1013 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 SLC35G5Q96KT7 338 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 TAAR9Q96RI9 348 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 NRIP2Q9BQI9 281 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 C1QTNF2Q9BXJ5 285 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 MOKQ9UQ07 419 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 A0A1W2PPV9 198 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 GGT3PA6NGU5 568 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 CLEC3AO75596 197 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 PSMB5P28074 263 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 OR12D2P58182 307 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 UBE2MP61081 183 aaKnown RBP17.26■□□□□ 0.35
HOXC6-202ENST00000394331 PJVKQ0ZLH3 352 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 OR4C11Q6IEV9 310 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 RPTNQ6XPR3 784 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 FCRLAQ7L513 359 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 POMGNT2Q8NAT1 580 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 WNT2BQ93097 391 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 TM7SF3Q9NS93 570 aa17.26■□□□□ 0.35
HOXC6-202ENST00000394331 OTOL1A6NHN0 477 aaPredicted RBP17.25■□□□□ 0.35
HOXC6-202ENST00000394331 PPIHO43447 177 aaKnown RBP17.25■□□□□ 0.35
HOXC6-202ENST00000394331 F12P00748 615 aaPredicted RBP17.25■□□□□ 0.35
HOXC6-202ENST00000394331 BUD31P41223 144 aaPredicted RBP17.25■□□□□ 0.35
HOXC6-202ENST00000394331 RAB2AP61019 212 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 NAAAQ02083 359 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 PIP5KL1Q5T9C9 394 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 UBE3DQ7Z6J8 389 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 SYNPRQ8TBG9 265 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 RNF141Q8WVD5 230 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 GFI1Q99684 422 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 NRTNQ99748 197 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 TUBA4BQ9H853 241 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 ADGRL4Q9HBW9 690 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 KRCC1Q9NPI7 259 aaPredicted RBP17.25■□□□□ 0.35
HOXC6-202ENST00000394331 TBC1D3BA6NDS4 549 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 GPR89AB7ZAQ6 455 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 F8VVB4 439 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 F8VWA3 439 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 TXNL1O43396 289 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 GPR89BP0CG08 455 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 PYCR1P32322 319 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 KHKP50053 298 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 CSNK1G2P78368 415 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 NKPD1Q17RQ9 610 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 NDUFAF7Q7L592 441 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.25■□□□□ 0.35
HOXC6-202ENST00000394331 SYS1Q8N2H4 156 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 KDF1Q8NAX2 398 aaPredicted RBP17.25■□□□□ 0.35
HOXC6-202ENST00000394331 XAGE5Q8WWM1 108 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 SAMD8Q96LT4 415 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 WDR77Q9BQA1 342 aaPredicted RBP17.25■□□□□ 0.35
HOXC6-202ENST00000394331 GGACTQ9BVM4 153 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 LGR4Q9BXB1 951 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 SEC61A2Q9H9S3 476 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 TMEM27Q9HBJ8 222 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 TREM1Q9NP99 234 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 ASH2LQ9UBL3 628 aa17.25■□□□□ 0.35
HOXC6-202ENST00000394331 A0A1B0GWJ7 208 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 IGLON5A6NGN9 336 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 RBBP9O75884 186 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 SLC34A2O95436 690 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 RNF224P0DH78 156 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 PRG2P13727 222 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 CDK2P24941 298 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 SSR2P43308 183 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 SRSF3P84103 164 aaKnown RBP17.24■□□□□ 0.35
HOXC6-202ENST00000394331 POU4F2Q12837 409 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 PLEKHN1Q494U1 663 aaPredicted RBP17.24■□□□□ 0.35
HOXC6-202ENST00000394331 ENPP7Q6UWV6 458 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 DRAM2Q6UX65 266 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 SDR9C7Q8NEX9 313 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 PRSS16Q9NQE7 514 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 KIAA1549LQ6ZVL6 1849 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 GLSO94925 669 aaPredicted RBP17.24■□□□□ 0.35
HOXC6-202ENST00000394331 APEHP13798 732 aaKnown RBP17.24■□□□□ 0.35
HOXC6-202ENST00000394331 SRMP19623 302 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 LAP3P28838 519 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 DLSTP36957 453 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 CASRP41180 1078 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 ANXA11P50995 505 aaKnown RBP17.24■□□□□ 0.35
HOXC6-202ENST00000394331 TMEM35AQ53FP2 167 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 FAM78AQ5JUQ0 283 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 TMEM244Q5VVB8 128 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 SLC30A7Q8NEW0 376 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 MALSU1Q96EH3 234 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 TRPC4Q9UBN4 977 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.24■□□□□ 0.35
HOXC6-202ENST00000394331 A0A0A6YYD5 115 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 LOC390937A0A1W2PQ73 354 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 ZC3H12DA2A288 527 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms