RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 XKRXQ6PP77 449 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 TFAP2EQ6VUC0 442 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 P3H2Q8IVL5 708 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 C1orf162Q8NEQ5 155 aaPredicted RBP11.76□□□□□ -0.53
USP44-202ENST00000393091 MOSPD2Q8NHP6 518 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 FANK1Q8TC84 345 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 EMC9Q9Y3B6 208 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 CFAP46Q8IYW2 2715 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 EIF4E1BA6NMX2 242 aaKnown RBP11.76□□□□□ -0.53
USP44-202ENST00000393091 ANKRD65E5RJM6 399 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 MSTNO14793 375 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 CHRNB4P30926 498 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 NTF4P34130 210 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 TEKQ02763 1124 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 SLX4IPQ5VYV7 408 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 LILRB4Q8NHJ6 448 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 ABHD3Q8WU67 409 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 SMPDL3BQ92485 455 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 NMNAT2Q9BZQ4 307 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 GRIP2Q9C0E4 1043 aa11.76□□□□□ -0.53
USP44-202ENST00000393091 NKX1-2Q9UD57 310 aaPredicted RBP11.76□□□□□ -0.53
USP44-202ENST00000393091 A0A1W2PRG6 482 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 LRRN3E7EW58 273 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 E2F6O75461 281 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 NR2C1P13056 603 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 RPS6KA3P51812 740 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 ARIH2OSQ8N7S6 290 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 POMGNT2Q8NAT1 580 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 ATP6V1C2Q8NEY4 427 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 OR8D4Q8NGM9 314 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 TSPAN32Q96QS1 320 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 ZNF556Q9HAH1 456 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 SOCS2O14508 198 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 AQP2P41181 271 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 TFF3Q07654 80 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 IGFBP7Q16270 282 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 ZNF362Q5T0B9 420 aaPredicted RBP11.75□□□□□ -0.53
USP44-202ENST00000393091 TMEM225Q6GV28 225 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 THSD4Q6ZMP0 1018 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 SDCCAG3Q96C92 435 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 SLC25A36Q96CQ1 311 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 SLC25A44Q96H78 314 aaPredicted RBP11.75□□□□□ -0.53
USP44-202ENST00000393091 CCDC120Q96HB5 630 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 FN3KQ9H479 309 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 MCIDASD6RGH6 385 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 KPNA4O00629 521 aaPredicted RBP11.75□□□□□ -0.53
USP44-202ENST00000393091 SAGP10523 405 aaPredicted RBP11.75□□□□□ -0.53
USP44-202ENST00000393091 HOXB1P14653 301 aaPredicted RBP11.75□□□□□ -0.53
USP44-202ENST00000393091 ZNF23P17027 643 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 ZNF43P17038 809 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 TCEA1P23193 301 aaKnown RBP11.75□□□□□ -0.53
USP44-202ENST00000393091 SLC25A1P53007 311 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 CRISP1P54107 249 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 KEAP1Q14145 624 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 C3orf36Q3SXR2 165 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 SLC35D2Q76EJ3 337 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 CCDC103Q8IW40 242 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 TUSC5Q8IXB3 177 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 RPRMLQ8N4K4 120 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 HRASLS5Q96KN8 279 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 U3KQV3 271 aa11.75□□□□□ -0.53
USP44-202ENST00000393091 CENPAP49450 140 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 SH3BGRP55822 239 aaPredicted RBP11.74□□□□□ -0.53
USP44-202ENST00000393091 KCNMB1Q16558 191 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 TMEM201Q5SNT2 666 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 P4HA3Q7Z4N8 544 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 ZBTB46Q86UZ6 589 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 HS3ST5Q8IZT8 346 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 MBOAT4Q96T53 435 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 TNFRSF10DQ9UBN6 386 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 RNF6Q9Y252 685 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 KLF2Q9Y5W3 355 aaPredicted RBP11.74□□□□□ -0.53
USP44-202ENST00000393091 KALRNO60229 2985 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 DNAJC13O75165 2243 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 TRAV27A0A087WT01 109 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 CCL21O00585 134 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 OPN1LWP04000 364 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 ADORA3P0DMS8 318 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 IGFBP5P24593 272 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 PEX19P40855 299 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 UQCRFS1P47985 274 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 SMSP52788 366 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 SORDQ00796 357 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 PMPCAQ10713 525 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 Q6ZT83 130 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 FBLIM1Q8WUP2 373 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 ITLN2Q8WWU7 325 aaPredicted RBP11.74□□□□□ -0.53
USP44-202ENST00000393091 PLA2G12AQ9BZM1 189 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 ENKD1Q9H0I2 346 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 CMC2Q9NRP2 79 aa11.74□□□□□ -0.53
USP44-202ENST00000393091 NDRG4Q9ULP0 352 aaKnown RBP11.74□□□□□ -0.53
USP44-202ENST00000393091 MAGED1Q9Y5V3 778 aaPredicted RBP11.74□□□□□ -0.53
USP44-202ENST00000393091 H0YAE9 185 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 HLA-DOBP13765 273 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 ACADSP16219 412 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 CDH2P19022 906 aaPredicted RBP11.73□□□□□ -0.53
USP44-202ENST00000393091 IL18R1Q13478 541 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 P2RY6Q15077 328 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 ACKR1Q16570 336 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 ABHD12BQ7Z5M8 362 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms