RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 EMDP50402 254 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 TCL1AP56279 114 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 RPS27AP62979 156 aaKnown RBP3.15□□□□□ -1.9
XRN1-202ENST00000392981 TGFBR3Q03167 851 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 ST3GAL3Q11203 375 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 MFAP5Q13361 173 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 MARCH8Q5T0T0 291 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 LCE2DQ5TA82 110 aaPredicted RBP3.15□□□□□ -1.9
XRN1-202ENST00000392981 C1orf189Q5VU69 101 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 EXD3Q8N9H8 876 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 SLC38A9Q8NBW4 561 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 RNASEH2CQ8TDP1 164 aaKnown RBP3.15□□□□□ -1.9
XRN1-202ENST00000392981 IL17FQ96PD4 163 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 NKX3-1Q99801 234 aaPredicted RBP3.15□□□□□ -1.9
XRN1-202ENST00000392981 DHRS9Q9BPW9 319 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 BARHL1Q9BZE3 327 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 COMMD4Q9H0A8 199 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 DHX35Q9H5Z1 703 aaKnown RBP3.15□□□□□ -1.9
XRN1-202ENST00000392981 SPHK2Q9NRA0 654 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 FAIMQ9NVQ4 179 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 C1orf109Q9NX04 203 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 PAQR5Q9NXK6 330 aaPredicted RBP3.15□□□□□ -1.9
XRN1-202ENST00000392981 SAR1BQ9Y6B6 198 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 RTEL1-TNFRSF6BF6WH68 1400 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 SETD5Q9C0A6 1442 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 TEX51A0A1B0GUA7 166 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 PRMT5O14744 637 aaPredicted RBP3.15□□□□□ -1.91
XRN1-202ENST00000392981 STX10O60499 249 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 ATF6P18850 670 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 LEPP41159 167 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 CYP24A1Q07973 514 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 C2orf80Q0P641 193 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 TWF1Q12792 350 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 MED21Q13503 144 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 QRICH1Q2TAL8 776 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 UNC50Q53HI1 259 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 SIRPB2Q5JXA9 342 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 PRR31Q5SQ13 230 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 LY6G5CQ5SRR4 150 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 TMEM207Q6UWW9 146 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 TMIGD1Q6UXZ0 262 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 PRSS48Q7RTY5 328 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 CCNYL1Q8N7R7 359 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 TMEM178AQ8NBL3 297 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 HAS1Q92839 578 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 ZNF503Q96F45 646 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 P2RY11Q96G91 374 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 NARS2Q96I59 477 aaKnown RBP3.15□□□□□ -1.91
XRN1-202ENST00000392981 CDCA3Q99618 268 aaPredicted RBP3.15□□□□□ -1.91
XRN1-202ENST00000392981 WDR77Q9BQA1 342 aaPredicted RBP3.15□□□□□ -1.91
XRN1-202ENST00000392981 TRIM15Q9C019 465 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 KIF25Q9UIL4 384 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 MRPS28Q9Y2Q9 187 aaKnown RBP3.15□□□□□ -1.91
XRN1-202ENST00000392981 PTGDR2Q9Y5Y4 395 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 HECW1Q76N89 1606 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 B8ZZF3 427 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 CDC7O00311 574 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 PCDH7O60245 1069 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 SPAG7O75391 227 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 SEMA3DO95025 777 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 FADS2O95864 444 aaKnown RBP3.15□□□□□ -1.91
XRN1-202ENST00000392981 PRSS2P07478 247 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 H2BFMP0C1H6 154 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 ITGA2P17301 1181 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 GLRA1P23415 457 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 TMEM187Q14656 261 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 ZNF284Q2VY69 593 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 BEAN1Q3B7T3 259 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 LY6G6FQ5SQ64 297 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 SUSD4Q5VX71 490 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 METTL21CQ5VZV1 264 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 ZNF770Q6IQ21 691 aaPredicted RBP3.15□□□□□ -1.91
XRN1-202ENST00000392981 TMEM184AQ6ZMB5 413 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 HSD11B1LQ7Z5J1 315 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 SLC39A11Q8N1S5 342 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 DUSP18Q8NEJ0 188 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 UBE2E3Q969T4 207 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 TMEM159Q96B96 161 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 C8orf44Q96CB5 159 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 TGS1Q96RS0 853 aaKnown RBP3.15□□□□□ -1.91
XRN1-202ENST00000392981 UGT2B28Q9BY64 529 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 ISYNA1Q9NPH2 558 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 B4GALT7Q9UBV7 327 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 FBXL3Q9UKT7 428 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 DHRS7Q9Y394 339 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 SAMHD1Q9Y3Z3 626 aaKnown RBP3.15□□□□□ -1.91
XRN1-202ENST00000392981 XDHP47989 1333 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 ARHGEF5Q12774 1597 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 TET3O43151 1660 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 RGPD8O14715 1765 aaPredicted RBP3.15□□□□□ -1.91
XRN1-202ENST00000392981 GNG14A0A1W2PPG7 69 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 DAPL1A0PJW8 107 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 TMEM200CA6NKL6 621 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 EFCAB7A8K855 629 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 CHST1O43916 411 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 SERPINB7O75635 380 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 SERPINA5P05154 406 aa3.15□□□□□ -1.91
XRN1-202ENST00000392981 SNRPAP09012 282 aaKnown RBP3.15□□□□□ -1.91
XRN1-202ENST00000392981 ACAA1P09110 424 aaPredicted RBP3.15□□□□□ -1.91
XRN1-202ENST00000392981 GNAO1P09471 354 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms