RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 SRMP19623 302 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 FAM78AQ5JUQ0 283 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 NKAIN4Q8IVV8 208 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 LINC01465Q8N7H1 131 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 OR6M1Q8NGM8 313 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 RBPMSQ93062 196 aaKnown RBP12.13□□□□□ -0.47
LCA5-202ENST00000392959 C1orf123Q9NWV4 160 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 EMC9Q9Y3B6 208 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 DDAH2O95865 285 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 LGI1O95970 557 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 C1QBP02746 253 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 SBK2P0C263 348 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 RPS2P15880 293 aaKnown RBP12.13□□□□□ -0.47
LCA5-202ENST00000392959 ARRB2P32121 409 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 DYNC2LI1Q8TCX1 351 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 ST7LQ8TDW4 575 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 TEAD3Q99594 435 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 PDCD1LG2Q9BQ51 273 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 STEAP1Q9UHE8 339 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 CORINQ9Y5Q5 1042 aa12.13□□□□□ -0.47
LCA5-202ENST00000392959 PRAMEF27A3QJZ7 478 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 FCGR2AP12318 317 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 POU3F2P20265 443 aaPredicted RBP12.12□□□□□ -0.47
LCA5-202ENST00000392959 RPP30P78346 268 aaKnown RBP12.12□□□□□ -0.47
LCA5-202ENST00000392959 HTD2P86397 168 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 TMEM201Q5SNT2 666 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 GLYATL3Q5SZD4 288 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 PRAMEF9Q5VWM5 478 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 FBXO46Q6PJ61 603 aaPredicted RBP12.12□□□□□ -0.47
LCA5-202ENST00000392959 TMEM64Q6YI46 380 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 MED25Q71SY5 747 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 KLHDC8BQ8IXV7 354 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 SLC22A24Q8N4F4 322 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 OR5D18Q8NGL1 313 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 PSMF1Q92530 271 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 LIN37Q96GY3 246 aaPredicted RBP12.12□□□□□ -0.47
LCA5-202ENST00000392959 Q96M85 177 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 TOX2Q96NM4 488 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 SLC19A3Q9BZV2 496 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 ZMAT3Q9HA38 289 aaKnown RBP12.12□□□□□ -0.47
LCA5-202ENST00000392959 GPR55Q9Y2T6 319 aaPredicted RBP12.12□□□□□ -0.47
LCA5-202ENST00000392959 ASB1Q9Y576 335 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 PUS1Q9Y606 427 aaKnown RBP eCLIP12.12□□□□□ -0.47
LCA5-202ENST00000392959 SLC5A10A0PJK1 596 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 ZNF705GA8MUZ8 300 aaPredicted RBP12.12□□□□□ -0.47
LCA5-202ENST00000392959 TSTD3H0UI37 97 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 TOR1AO14656 332 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 ICMTO60725 284 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 PMS2P2O95744 297 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 BCL6P41182 706 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 UBE2KP61086 200 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 MSMO1Q15800 293 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 OTUD1Q5VV17 481 aaPredicted RBP12.12□□□□□ -0.47
LCA5-202ENST00000392959 ANKRD34AQ69YU3 496 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 PXT1Q8NFP0 134 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 DVL3Q92997 716 aaPredicted RBP12.12□□□□□ -0.47
LCA5-202ENST00000392959 RBMXL1Q96E39 390 aaKnown RBP12.12□□□□□ -0.47
LCA5-202ENST00000392959 LCORQ96JN0 433 aaPredicted RBP12.12□□□□□ -0.47
LCA5-202ENST00000392959 MCOLN1Q9GZU1 580 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 OR51B6Q9H340 312 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 TNFRSF12AQ9NP84 129 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 ACAD8Q9UKU7 415 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 H3BQ06 376 aaPredicted RBP12.12□□□□□ -0.47
LCA5-202ENST00000392959 M0QYG6 137 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 OIP5O43482 229 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 IL2RGP31785 369 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 ETV1P50549 477 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 MFGE8Q08431 387 aaPredicted RBP12.12□□□□□ -0.47
LCA5-202ENST00000392959 EBPQ15125 230 aaKnown RBP12.12□□□□□ -0.47
LCA5-202ENST00000392959 SLC36A2Q495M3 483 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 SLC35D3Q5M8T2 416 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 GABARAPL1Q9H0R8 117 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 TMED7-TICAM2A0A0A6YYA0 188 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 GFYI3L273 518 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 GLCEO94923 617 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 NME2P22392 152 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 TEKQ02763 1124 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 MFAP5Q13361 173 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 FAM26DQ5JW98 314 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 PRSS45Q7RTY3 260 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 GABARAPL3Q9BY60 117 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 IKZF5Q9H5V7 419 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 NTN4Q9HB63 628 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 LTB4R2Q9NPC1 389 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 ATP13A2Q9NQ11 1180 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 TMED7Q9Y3B3 224 aa12.12□□□□□ -0.47
LCA5-202ENST00000392959 C4AP0C0L4 1744 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 C4BP0C0L5 1744 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 DOT1LQ8TEK3 1739 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 TMEM202A6NGA9 273 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 CEBPZOSA8MTT3 80 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 B3GALT4O96024 378 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 OMGP23515 440 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 GDF1P27539 372 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 BATFQ16520 125 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 ACSM5Q6NUN0 579 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 VASH1Q7L8A9 365 aaPredicted RBP12.11□□□□□ -0.47
LCA5-202ENST00000392959 SLC16A14Q7RTX9 510 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 PPP1R3BQ86XI6 285 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 OR5L1Q8NGL2 311 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms