RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 NANSQ9NR45 359 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 SMC4Q9NTJ3 1288 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 HRASLS2Q9NWW9 162 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 ANKMY1Q9P2S6 941 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 SPRR3Q9UBC9 169 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 FBXO5Q9UKT4 447 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 INTS6Q9UL03 887 aaKnown RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 MCTS1Q9ULC4 181 aaKnown RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 KLF12Q9Y4X4 402 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 CSDC2Q9Y534 153 aaKnown RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 FAM169AQ9Y6X4 670 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 PXDNLA1KZ92 1463 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 PTPRMP28827 1452 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 ERVK-7P63135 1459 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 PTPRDP23468 1912 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 HELZP42694 1942 aaKnown RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 BIVM-ERCC5R4GMW8 1640 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 RALGAPA2Q2PPJ7 1873 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 MED1Q15648 1581 aaPredicted RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 ILVBLA1L0T0 632 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 GOLGA6L3A6NEY3 463 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 GAGE10A6NGK3 116 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 C19orf81C9J6K1 198 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 C9JQL5 133 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 C9JVG2 144 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 F8WEM9 126 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 K7EIL1 84 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 CCL24O00175 119 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 FAAHO00519 579 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 USO1O60763 962 aaKnown RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 FCGR3BO75015 233 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 DNAJB6O75190 326 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 SRP72O76094 671 aaKnown RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 CST7O76096 145 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 CLSTN1O94985 981 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLU7O95391 586 aaKnown RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 CLIC3O95833 236 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 NCR2O95944 276 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 MGST1P10620 155 aaKnown RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 NEFHP12036 1026 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 FOSL2P15408 326 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 F8A1P23610 371 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 CST5P28325 142 aaPredicted RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 ETV6P41212 452 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 MAGEA8P43361 318 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 KCNJ3P48549 501 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLC9A3P48764 834 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 GDI2P50395 445 aaKnown RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 CLDN8P56748 225 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 MLF1P58340 268 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 MAT1AQ00266 395 aaKnown RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 CUL4BQ13620 913 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 ITIH4Q14624 930 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 GANABQ14697 944 aaKnown RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 ZNHIT3Q15649 155 aaPredicted RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 SNRNP35Q16560 246 aaKnown RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 HLA-DRB5Q30154 266 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 ZNF791Q3KP31 576 aaPredicted RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 MAP9Q49MG5 647 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLC9B1Q4ZJI4 515 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 GLRA4Q5JXX5 417 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 PLEKHS1Q5SXH7 462 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLC25A25Q6KCM7 469 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 CXorf57Q6NSI4 855 aaKnown RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 NEPROQ6NW34 567 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 PODNL1Q6PEZ8 512 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 SRLQ86TD4 932 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 SIAH3Q8IW03 269 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 KATNAL2Q8IYT4 538 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 ATOH7Q8N100 152 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 TMEM105Q8N8V8 129 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR10AD1Q8NGE0 317 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR10G4Q8NGN3 311 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 C8orf46Q8TAG6 207 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 MCOLN3Q8TDD5 553 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 RTN4IP1Q8WWV3 396 aaPredicted RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 PRPF31Q8WWY3 499 aaKnown RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR5P3Q8WZ94 311 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 SECISBP2LQ93073 1101 aaKnown RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 TOP1MTQ969P6 601 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 TTC17Q96AE7 1141 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 PPWD1Q96BP3 646 aaKnown RBP-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 FGGYQ96C11 551 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 SDCCAG3Q96C92 435 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 DNAJC19Q96DA6 116 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 AK8Q96MA6 479 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 PSMD1Q99460 953 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 REEP2Q9BRK0 252 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 TSSK1BQ9BXA7 367 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 TTTY12Q9BZ98 90 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 ULBP1Q9BZM6 244 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 PPDPFQ9H3Y8 114 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 DNAJC18Q9H819 358 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 BRF2Q9HAW0 419 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 CISHQ9NSE2 258 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 PNPLA3Q9NST1 481 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 CRIPTQ9P021 101 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 DOK5Q9P104 306 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 CHRNA9Q9UGM1 479 aa-1.58□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms