RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ZSCAN1Q8NBB4 408 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 HAVCR2Q8TDQ0 301 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 MRPS30Q9NP92 439 aaKnown RBP12.68□□□□□ -0.38
SDC1-202ENST00000381150 FBXO34Q9NWN3 711 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 CLDND1Q9NY35 253 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 ADAM29Q9UKF5 820 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 ZNF443Q9Y2A4 671 aaPredicted RBP12.68□□□□□ -0.38
SDC1-202ENST00000381150 PLEKHM1Q9Y4G2 1056 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 IER3IP1Q9Y5U9 82 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 ATG2BQ96BY7 2078 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 TRBV23OR9-2A0A075B6M9 112 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 A0A0A6YYD5 115 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 A0A1W2PP55 124 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 NDUFB6O95139 128 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 CD3DP04234 171 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 OR8G3PP0DMU2 310 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 BDH1Q02338 343 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 OR1Q1Q15612 314 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 HFEQ30201 348 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 FAM199XQ6PEV8 388 aaPredicted RBP12.68□□□□□ -0.38
SDC1-202ENST00000381150 MTSS1LQ765P7 747 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 LDLRAD3Q86YD5 345 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 OR56A1Q8NGH5 318 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 PNPLA2Q96AD5 504 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 SMIM19Q96E16 107 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 OR5V1Q9UGF6 321 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 PRUNE2Q8WUY3 3088 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 RAB19A4D1S5 217 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 NAP1L6A6NFF2 107 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 SULT1C2O00338 296 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 SYT5O00445 386 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 EMC8O43402 210 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 CEACAM5P06731 702 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 SLC35G4P0C7Q5 338 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 CNR1P21554 472 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 BDKRB2P30411 391 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 HOXA1P49639 335 aaPredicted RBP12.68□□□□□ -0.38
SDC1-202ENST00000381150 PSMD4P55036 377 aaKnown RBP12.68□□□□□ -0.38
SDC1-202ENST00000381150 FXYD6P3P58550 94 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 MLC1Q15049 377 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 FAM111BQ6SJ93 734 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 ZNF836Q6ZNA1 936 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 ZNF761Q86XN6 746 aaPredicted RBP12.68□□□□□ -0.38
SDC1-202ENST00000381150 TMEFF1Q8IYR6 380 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 SPICQ8N5J4 248 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 OR51D1Q8NGF3 324 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 KISS1RQ969F8 398 aaPredicted RBP12.68□□□□□ -0.38
SDC1-202ENST00000381150 GIMAP5Q96F15 307 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 NMNAT3Q96T66 252 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 SLC35A3Q9Y2D2 325 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 OR2M5A3KFT3 312 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 TTLL8A6PVC2 850 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 C4orf51C9J302 202 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 DOK2O60496 412 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 SLC25A12O75746 678 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 C5AR1P21730 350 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 VAMP1P23763 118 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 PDZK1IP1Q13113 114 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 PON3Q15166 354 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 ZIC1Q15915 447 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 AMZ1Q400G9 498 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 C9orf50Q5SZB4 431 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 MRPL2Q5T653 305 aaKnown RBP12.67□□□□□ -0.38
SDC1-202ENST00000381150 RBMS3Q6XE24 437 aaKnown RBP12.67□□□□□ -0.38
SDC1-202ENST00000381150 KRT77Q7Z794 578 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 PXKQ7Z7A4 578 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 SVBPQ8N300 66 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 STEAP2Q8NFT2 490 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 OR10R2Q8NGX6 335 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 SLC22A8Q8TCC7 542 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 FAM131CQ96AQ9 280 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 TSSK2Q96PF2 358 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 WDR13Q9H1Z4 485 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 POFUT1Q9H488 388 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 BCL2L10Q9HD36 194 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 YBX2Q9Y2T7 364 aaKnown RBP12.67□□□□□ -0.38
SDC1-202ENST00000381150 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.67□□□□□ -0.38
SDC1-202ENST00000381150 RNF215Q9Y6U7 377 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 SPTBN5Q9NRC6 3674 aaKnown RBP12.67□□□□□ -0.38
SDC1-202ENST00000381150 CLEC3AO75596 197 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 ZIC2O95409 532 aaPredicted RBP12.67□□□□□ -0.38
SDC1-202ENST00000381150 IFNGP01579 166 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 DLSTP36957 453 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 TDGQ13569 410 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 PRAMEF17Q5VTA0 474 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 MRGPREQ86SM8 312 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 SLC35F2Q8IXU6 374 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 CCDC36Q8IYA8 594 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 ZNF511Q8NB15 262 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 FOXN4Q96NZ1 517 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 MS4A4EQ96PG1 132 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 CMC2Q9NRP2 79 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 CTSFQ9UBX1 484 aa12.67□□□□□ -0.38
SDC1-202ENST00000381150 TRAPPC13A5PLN9 417 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 CRYBA1P05813 215 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 HIST1H1CP16403 213 aaKnown RBP12.66□□□□□ -0.38
SDC1-202ENST00000381150 MNDAP41218 407 aa12.66□□□□□ -0.38
SDC1-202ENST00000381150 KIR2DL1P43626 348 aaPredicted RBP12.66□□□□□ -0.38
SDC1-202ENST00000381150 LTBQ06643 244 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms