RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 CLDN8P56748 225 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 CARD17Q5XLA6 110 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 WBP2NLQ6ICG8 309 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 TMEM154Q6P9G4 183 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 ZNF813Q6ZN06 617 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 USP51Q70EK9 711 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 RETREG3Q86VR2 466 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 PIK3C3Q8NEB9 887 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 MFSD8Q8NHS3 518 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 GTF3AQ92664 365 aaKnown RBP14.73□□□□□ -0.05
HMGN1-203ENST00000380748 OXGR1Q96P68 337 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 TRNT1Q96Q11 434 aaKnown RBP14.73□□□□□ -0.05
HMGN1-203ENST00000380748 GPA33Q99795 319 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 GAL3ST1Q99999 423 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 PLEK2Q9NYT0 353 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 MARCOQ9UEW3 520 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-203ENST00000380748 SLC7A8Q9UHI5 535 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 TRIM13O60858 407 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 AHSA1O95433 338 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 B4GALT1P15291 398 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 CHI3L1P36222 383 aaPredicted RBP14.72□□□□□ -0.05
HMGN1-203ENST00000380748 RPS5P46782 204 aaKnown RBP14.72□□□□□ -0.05
HMGN1-203ENST00000380748 CCT5P48643 541 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 TEKQ02763 1124 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 CKAP4Q07065 602 aaKnown RBP14.72□□□□□ -0.05
HMGN1-203ENST00000380748 C1DQ13901 141 aaKnown RBP14.72□□□□□ -0.05
HMGN1-203ENST00000380748 GNA13Q14344 377 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 RAB39AQ14964 217 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 PCGF3Q3KNV8 242 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 MMEL1Q495T6 779 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 ATG16L1Q676U5 607 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 RGS7BPQ6MZT1 257 aaPredicted RBP14.72□□□□□ -0.05
HMGN1-203ENST00000380748 SYT10Q6XYQ8 523 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 TREML1Q86YW5 311 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 C1QL4Q86Z23 238 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 ZNF440Q8IYI8 595 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 WFDC12Q8WWY7 111 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 POP5Q969H6 163 aaKnown RBP14.72□□□□□ -0.05
HMGN1-203ENST00000380748 TMIGD2Q96BF3 282 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 SLC35A5Q9BS91 424 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 DPY30Q9C005 99 aa14.72□□□□□ -0.05
HMGN1-203ENST00000380748 LEF1Q9UJU2 399 aaPredicted RBP14.72□□□□□ -0.05
HMGN1-203ENST00000380748 CDHR4A6H8M9 788 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 CLDN34H7C241 214 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 TRAF3IP2O43734 574 aaPredicted RBP14.71□□□□□ -0.05
HMGN1-203ENST00000380748 ALX3O95076 343 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 RAB36O95755 333 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 DBIP07108 87 aaKnown RBP14.71□□□□□ -0.05
HMGN1-203ENST00000380748 FAM157BP0CG42 384 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 PRG2P13727 222 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 GTF2E2P29084 291 aaKnown RBP14.71□□□□□ -0.05
HMGN1-203ENST00000380748 ATP4BP51164 291 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 RAB1AP62820 205 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 ZNF836Q6ZNA1 936 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 LRRC74BQ6ZQY2 392 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 RNF130Q86XS8 419 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 ZNF584Q8IVC4 421 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 C20orf196Q8IYI0 205 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 NOA1Q8NC60 698 aaKnown RBP14.71□□□□□ -0.05
HMGN1-203ENST00000380748 OR8J2Q8NGG1 315 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 STK35Q8TDR2 534 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 SNX33Q8WV41 574 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 RAB1CQ92928 201 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 TUBGCP3Q96CW5 907 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 KTI12Q96EK9 354 aaPredicted RBP14.71□□□□□ -0.05
HMGN1-203ENST00000380748 TIMD4Q96H15 378 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 CCT8L2Q96SF2 557 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 MMP27Q9H306 513 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 MTHFD2LQ9H903 347 aaPredicted RBP14.71□□□□□ -0.05
HMGN1-203ENST00000380748 MMP26Q9NRE1 261 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 NKIRAS2Q9NYR9 191 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 UBAP1Q9NZ09 502 aa14.71□□□□□ -0.05
HMGN1-203ENST00000380748 IGLV3-9A0A075B6K5 115 aa14.7□□□□□ -0.06
HMGN1-203ENST00000380748 TPD52L2O43399 206 aaKnown RBP14.7□□□□□ -0.06
HMGN1-203ENST00000380748 PATE4P0C8F1 98 aa14.7□□□□□ -0.06
HMGN1-203ENST00000380748 PCGF2P35227 344 aa14.7□□□□□ -0.06
HMGN1-203ENST00000380748 KLF3P57682 345 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-203ENST00000380748 ERVS71-1P61550 626 aa14.7□□□□□ -0.06
HMGN1-203ENST00000380748 COPZ1P61923 177 aa14.7□□□□□ -0.06
HMGN1-203ENST00000380748 EGR4Q05215 589 aa14.7□□□□□ -0.06
HMGN1-203ENST00000380748 MFSD13AQ14CX5 517 aa14.7□□□□□ -0.06
HMGN1-203ENST00000380748 TSTQ16762 297 aaKnown RBP14.7□□□□□ -0.06
HMGN1-203ENST00000380748 HFEQ30201 348 aa14.7□□□□□ -0.06
HMGN1-203ENST00000380748 SPATC1Q76KD6 591 aa14.7□□□□□ -0.06
HMGN1-203ENST00000380748 TRMT10CQ7L0Y3 403 aaKnown RBP14.7□□□□□ -0.06
HMGN1-203ENST00000380748 ZNF627Q7L945 461 aa14.7□□□□□ -0.06
HMGN1-203ENST00000380748 VRK2Q86Y07 508 aa14.7□□□□□ -0.06
HMGN1-203ENST00000380748 PAQR4Q8N4S7 273 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-203ENST00000380748 GLB1L3Q8NCI6 653 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-203ENST00000380748 OR51B6Q9H340 312 aa14.7□□□□□ -0.06
HMGN1-203ENST00000380748 GPR160Q9UJ42 338 aa14.7□□□□□ -0.06
HMGN1-203ENST00000380748 MID2Q9UJV3 735 aa14.7□□□□□ -0.06
HMGN1-203ENST00000380748 PURGQ9UJV8 347 aaKnown RBP14.7□□□□□ -0.06
HMGN1-203ENST00000380748 MMP24Q9Y5R2 645 aa14.7□□□□□ -0.06
HMGN1-203ENST00000380748 SOX21Q9Y651 276 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-203ENST00000380748 PPIAL4EA0A075B759 164 aa14.69□□□□□ -0.06
HMGN1-203ENST00000380748 A0A096LPI6 279 aa14.69□□□□□ -0.06
HMGN1-203ENST00000380748 PPIAL4CA0A0B4J2A2 164 aa14.69□□□□□ -0.06
HMGN1-203ENST00000380748 PRSS51A0A1B0GVH4 220 aa14.69□□□□□ -0.06
HMGN1-203ENST00000380748 ISPDA4D126 451 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms