RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 FAM220AQ7Z4H9 259 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 TIGD4Q8IY51 512 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 RFLNBQ8N5W9 214 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 SPSB2Q99619 263 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 MARCH7Q9H992 704 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 FKBP7Q9Y680 259 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 TRBV11-1A0A0K0K1C0 115 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 ZNF879B4DU55 563 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 RAB3BP20337 219 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 DBPQ10586 325 aaPredicted RBP20.92■□□□□ 0.94
VPS16-201ENST00000380443 CDC20BQ86Y33 519 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 CRB3Q9BUF7 120 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 SDHAF3Q9NRP4 125 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 CYSLTR2Q9NS75 346 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 MRPL39Q9NYK5 338 aaKnown RBP20.92■□□□□ 0.94
VPS16-201ENST00000380443 OR6A2O95222 327 aa20.91■□□□□ 0.94
VPS16-201ENST00000380443 TALDO1P37837 337 aa20.91■□□□□ 0.94
VPS16-201ENST00000380443 RPL27P61353 136 aaKnown RBP20.91■□□□□ 0.94
VPS16-201ENST00000380443 YIF1BQ5BJH7 314 aa20.91■□□□□ 0.94
VPS16-201ENST00000380443 PHF19Q5T6S3 580 aa20.91■□□□□ 0.94
VPS16-201ENST00000380443 MRPL14Q6P1L8 145 aaKnown RBP20.91■□□□□ 0.94
VPS16-201ENST00000380443 ADAD1Q96M93 576 aaKnown RBP20.91■□□□□ 0.94
VPS16-201ENST00000380443 KLHL15Q96M94 604 aa20.91■□□□□ 0.94
VPS16-201ENST00000380443 PPIL3Q9H2H8 161 aaKnown RBP20.91■□□□□ 0.94
VPS16-201ENST00000380443 TXNIPQ9H3M7 391 aa20.91■□□□□ 0.94
VPS16-201ENST00000380443 ABRACLQ9P1F3 81 aa20.91■□□□□ 0.94
VPS16-201ENST00000380443 ZNF281Q9Y2X9 895 aa20.91■□□□□ 0.94
VPS16-201ENST00000380443 MPDZO75970 2070 aa20.91■□□□□ 0.94
VPS16-201ENST00000380443 MYO15AQ9UKN7 3530 aa20.91■□□□□ 0.94
VPS16-201ENST00000380443 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 A0A1W2PRG6 482 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 MEN1O00255 615 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 NTN3O00634 580 aaPredicted RBP20.9■□□□□ 0.94
VPS16-201ENST00000380443 SERPINI2O75830 405 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 SYPP08247 313 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 SLC2A2P11168 524 aaPredicted RBP20.9■□□□□ 0.94
VPS16-201ENST00000380443 PRKCAP17252 672 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 EGR3Q06889 387 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 TRIQKQ629K1 86 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 C19orf18Q8NEA5 215 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 WDR76Q9H967 626 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 SRA1Q9HD15 236 aaKnown RBP20.9■□□□□ 0.94
VPS16-201ENST00000380443 ACOXLQ9NUZ1 547 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 DNAH14Q0VDD8 3507 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 A0A0G2JK05 382 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 NOTOA8MTQ0 251 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 FAM25AB3EWG3 89 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 FAM25CB3EWG5 89 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 FAM25GB3EWG6 89 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 ETV2O00321 342 aaPredicted RBP20.9■□□□□ 0.94
VPS16-201ENST00000380443 DVL2O14641 736 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 APEX1P27695 318 aaKnown RBP20.9■□□□□ 0.94
VPS16-201ENST00000380443 THBS2P35442 1172 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 ZP4Q12836 540 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 IL18Q14116 193 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 SLC23A3Q6PIS1 610 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 NRARPQ7Z6K4 114 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 NR2C2APQ86WQ0 139 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 GHDCQ8N2G8 530 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 Q8N402 240 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 ZNF511Q8NB15 262 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 IL17RDQ8NFM7 739 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 NLGN4YQ8NFZ3 816 aaPredicted RBP20.9■□□□□ 0.94
VPS16-201ENST00000380443 SLC22A8Q8TCC7 542 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 CMTM3Q96MX0 182 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 FSCN3Q9NQT6 498 aa20.9■□□□□ 0.94
VPS16-201ENST00000380443 IGLV3-32A0A0A0MS00 114 aa20.89■□□□□ 0.93
VPS16-201ENST00000380443 TMEM200CA6NKL6 621 aa20.89■□□□□ 0.93
VPS16-201ENST00000380443 PDCD5O14737 125 aa20.89■□□□□ 0.93
VPS16-201ENST00000380443 FLRT2O43155 660 aa20.89■□□□□ 0.93
VPS16-201ENST00000380443 ZNF208O43345 1280 aa20.89■□□□□ 0.93
VPS16-201ENST00000380443 KRT8P05787 483 aa20.89■□□□□ 0.93
VPS16-201ENST00000380443 NPR2P20594 1047 aa20.89■□□□□ 0.93
VPS16-201ENST00000380443 RBMS1P29558 406 aaKnown RBP20.89■□□□□ 0.93
VPS16-201ENST00000380443 GRPRP30550 384 aa20.89■□□□□ 0.93
VPS16-201ENST00000380443 FBXW4P57775 412 aa20.89■□□□□ 0.93
VPS16-201ENST00000380443 RPS11P62280 158 aaKnown RBP eCLIP20.89■□□□□ 0.93
VPS16-201ENST00000380443 POMZP3Q6PJE2 187 aa20.89■□□□□ 0.93
VPS16-201ENST00000380443 OR6V1Q8N148 313 aa20.89■□□□□ 0.93
VPS16-201ENST00000380443 AGBL5Q8NDL9 886 aa20.89■□□□□ 0.93
VPS16-201ENST00000380443 ZNF519Q8TB69 540 aa20.89■□□□□ 0.93
VPS16-201ENST00000380443 SLC25A36Q96CQ1 311 aa20.89■□□□□ 0.93
VPS16-201ENST00000380443 FAM122AQ96E09 287 aa20.89■□□□□ 0.93
VPS16-201ENST00000380443 RYDENQ9NUL5 291 aaKnown RBP20.89■□□□□ 0.93
VPS16-201ENST00000380443 VSX1Q9NZR4 365 aaPredicted RBP20.89■□□□□ 0.93
VPS16-201ENST00000380443 RABL2AQ9UBK7 228 aaPredicted RBP20.89■□□□□ 0.93
VPS16-201ENST00000380443 RABL2BQ9UNT1 228 aa20.89■□□□□ 0.93
VPS16-201ENST00000380443 NPIPB13A6NJU9 1138 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 NPIPB4C9JG80 1138 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 D6RAR5 112 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 PLPP3O14495 311 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 ARHGEF9O43307 516 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 GMFGO60234 142 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 ZNF432O94892 652 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 RFX2P48378 723 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 C1QL3Q5VWW1 255 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 RAB43Q86YS6 212 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 SCAIQ8N9R8 606 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 SUMF1Q8NBK3 374 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 ZNF248Q8NDW4 579 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms