RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 PFN4Q8NHR9 129 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 LZICQ8WZA0 190 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 CMTM5Q96DZ9 223 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 TXNDC15Q96J42 360 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 MPP4Q96JB8 637 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 C18orf12Q96KH6 178 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 HOPXQ9BPY8 73 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 PCDHAC1Q9H158 963 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 GSX1Q9H4S2 264 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 FKRPQ9H9S5 495 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 B3GAT2Q9NPZ5 323 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 SLC35F4A4IF30 521 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 E7EQL1 145 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 ATP6V1G2-DDX39BF2Z307 99 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 BLOC1S5-TXNDC5H3BN57 136 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 H7C1Q1 480 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 CXCR6O00574 342 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 TMCC2O75069 709 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 FZD7O75084 574 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 OR5F1O95221 314 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 LYPD3O95274 346 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 INHBBP09529 407 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 DANCRP0C864 163 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 IFNGR1P15260 489 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 IFNA8P32881 189 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 YAP1P46937 504 aaKnown RBP10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 SH3BGRP55822 239 aaPredicted RBP10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 BIDP55957 195 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 MELKQ14680 651 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 AGAP6Q5VW22 663 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 ANKRD16Q6P6B7 361 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 LINC00114Q6XXX2 140 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 B3GLCTQ6Y288 498 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 PXKQ7Z7A4 578 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 NKAIN4Q8IVV8 208 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 SLC15A3Q8IY34 581 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 LRRC17Q8N6Y2 441 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 TMEM255BQ8WV15 326 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 FAM162AQ96A26 154 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 HS6ST2Q96MM7 605 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 SLC38A2Q96QD8 506 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 DHRS9Q9BPW9 319 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 KCTD14Q9BQ13 255 aaPredicted RBP10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 ULBP2Q9BZM5 246 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 SLC19A3Q9BZV2 496 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 OBP2BQ9NPH6 170 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 RIMS3Q9UJD0 308 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 MOKQ9UQ07 419 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 POFUT2Q9Y2G5 429 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 ITPR3Q14573 2671 aa10.11□□□□□ -0.79
SMARCE1-203ENST00000377808 IGHV1-18A0A0C4DH31 117 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 LOC102725191A0A1B0GVB3 256 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 GMNCA6NCL1 334 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 MCIDASD6RGH6 385 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 NME4O00746 187 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 SNX3O60493 162 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 SERPINA1P01009 418 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 CD79AP11912 226 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 DRD4P21917 467 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 CSNK1A1P48729 337 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 UGT2B15P54855 530 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 PSME3P61289 254 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 SELENOWP63302 87 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 NPRL3Q12980 569 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 PHYHD1Q5SRE7 291 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 VHLLQ6RSH7 139 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 PRSS57Q6UWY2 283 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 Q71RC1 249 aaPredicted RBP10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 FKBP9P1Q75LS8 142 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 SLC35D2Q76EJ3 337 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 VTCN1Q7Z7D3 282 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 C20orf196Q8IYI0 205 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 TMEM123Q8N131 208 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 MUC15Q8N387 334 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 ANKK1Q8NFD2 765 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 TMEM239Q8WW34 195 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 BCL2L2Q92843 193 aaPredicted RBP10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 ZNF837Q96EG3 531 aaPredicted RBP10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 SGTBQ96EQ0 304 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 SMR3AQ99954 134 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 PRSS27Q9BQR3 290 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 BDH2Q9BUT1 245 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 TRAF4Q9BUZ4 470 aaPredicted RBP10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 POLR2J2Q9GZM3 115 aaKnown RBP10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 POLR2J3Q9H1A7 115 aaKnown RBP10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 DLL4Q9NR61 685 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 ZNF701Q9NV72 531 aaPredicted RBP10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 ADA2Q9NZK5 511 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 ZNF229Q9UJW7 825 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 ARID1AO14497 2285 aa10.1□□□□□ -0.79
SMARCE1-203ENST00000377808 ARPC4-TTLL3A0A0A6YYG9 625 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 ZNF99A8MXY4 864 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 RPL36A-HNRNPH2H7BZ11 118 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 NDUFAB1O14561 156 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 OR7A10O76100 309 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 CRYAAP02489 173 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 MT-ND1P03886 318 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 IFNW1P05000 195 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 B4GALT1P15291 398 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 FOSL1P15407 271 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms