RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SPDEFO95238 335 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 TSPAN15O95858 294 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 IGLV3-27P01718 113 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 CAPZBP47756 277 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 F2RL1P55085 397 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 CAV3P56539 151 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 TMEM207Q6UWW9 146 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 LILRA2Q8N149 483 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 OR4M1Q8NGD0 313 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 PDFQ9HBH1 243 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 B3GAT1Q9P2W7 334 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 GAPDHSO14556 408 aaPredicted RBP12.55□□□□□ -0.4
GPC6-201ENST00000377047 APOBEC1P41238 236 aaKnown RBP12.55□□□□□ -0.4
GPC6-201ENST00000377047 MSMO1Q15800 293 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 METAP1DQ6UB28 335 aaPredicted RBP12.55□□□□□ -0.4
GPC6-201ENST00000377047 SYT13Q7L8C5 426 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 PDZD9Q8IXQ8 264 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 ZNF679Q8IYX0 411 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 OR56B1Q8NGI3 324 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 ZBTB8AQ96BR9 441 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 ZNF583Q96ND8 569 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 NKX3-1Q99801 234 aaPredicted RBP12.55□□□□□ -0.4
GPC6-201ENST00000377047 SMIM3Q9BZL3 60 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 ASF1BQ9NVP2 202 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 MUTYHQ9UIF7 546 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 DSCR3O14972 297 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 HOXB5P09067 269 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 LUMP51884 338 aaPredicted RBP12.55□□□□□ -0.4
GPC6-201ENST00000377047 SLC46A3Q7Z3Q1 461 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 CPEB2Q7Z5Q1 589 aaKnown RBP12.55□□□□□ -0.4
GPC6-201ENST00000377047 BHLHE23Q8NDY6 225 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 OR6T1Q8NGN1 323 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 SSX3Q99909 188 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 GMPR2Q9P2T1 348 aaKnown RBP12.55□□□□□ -0.4
GPC6-201ENST00000377047 EDARQ9UNE0 448 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 TMEM221A6NGB7 291 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 SYT5O00445 386 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 SEC14L2O76054 403 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 PTTG1O95997 202 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 CTSLP07711 333 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 ZDHHC11BP0C7U3 371 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 BCORP1Q8N888 145 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 OR2T35Q8NGX2 323 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 GIMAP5Q96F15 307 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 MYO18AQ92614 2054 aaKnown RBP12.55□□□□□ -0.4
GPC6-201ENST00000377047 OR6C76A6NM76 312 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 HOXA1P49639 335 aaPredicted RBP12.55□□□□□ -0.4
GPC6-201ENST00000377047 CCL7P80098 99 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 CATR1Q13166 79 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 HES1Q14469 280 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 SLC10A1Q14973 349 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 OR52W1Q6IF63 320 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 TMEM71Q6P5X7 295 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 OR5AS1Q8N127 324 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 OR6V1Q8N148 313 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 RAB3CQ96E17 227 aa12.55□□□□□ -0.4
GPC6-201ENST00000377047 NUMA1Q14980 2115 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 DPM1O60762 260 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 CLDN12P56749 244 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 HLA-BQ31612 363 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 DCXRQ7Z4W1 244 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 POC1BQ8TC44 478 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 SLC25A43Q8WUT9 341 aaPredicted RBP12.54□□□□□ -0.4
GPC6-201ENST00000377047 NRG4Q8WWG1 115 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 TSLPQ969D9 159 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 SGK3Q96BR1 496 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 MYEOVQ96EZ4 313 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 DDX60LQ5H9U9 1706 aaKnown RBP12.54□□□□□ -0.4
GPC6-201ENST00000377047 GPRIN2O60269 458 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 PAHP00439 452 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 IL2RAP01589 272 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 IFNA4P05014 189 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 HTR2CP28335 458 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 SLC1A3P43003 542 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 EDDM3AQ14507 147 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 Q6ZNB5 142 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 LRRC56Q8IYG6 542 aaPredicted RBP12.54□□□□□ -0.4
GPC6-201ENST00000377047 ABHD4Q8TB40 342 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 PIGTQ969N2 578 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 AMBRA1Q9C0C7 1298 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 OR2B2Q9GZK3 357 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 ATP23Q9Y6H3 246 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 SCN7AQ01118 1682 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 UPK1BO75841 260 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 NSA2O95478 260 aaKnown RBP12.54□□□□□ -0.4
GPC6-201ENST00000377047 GFERP55789 205 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 BTG2P78543 158 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 AGBL4Q5VU57 503 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 PGAP1Q75T13 922 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 BPIFB2Q8N4F0 458 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 SEMA4CQ9C0C4 833 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 PIGLQ9Y2B2 252 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 SNX11Q9Y5W9 270 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 TRGV8A0A0C4DH27 118 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 A0A1W2PR48 441 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 MT-ATP6P00846 226 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 CD14P08571 375 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 MYBPHQ13203 477 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 SLC9A3R2Q15599 337 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 MAML2Q8IZL2 1156 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms