RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 KITP10721 976 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 USF1P22415 310 aaPredicted RBP8.25□□□□□ -1.09
C9orf85-202ENST00000377027 CXCR1P25024 350 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 MAP2K6P52564 334 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 DSTNP60981 165 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 GGTLC2Q14390 218 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 GLIPR1L2Q4G1C9 344 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 CYB5R2Q6BCY4 276 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 NIPAL3Q6P499 406 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 ANKRD16Q6P6B7 361 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 NHLRC1Q6VVB1 395 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 PEX5LQ8IYB4 626 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 ZCCHC24Q8N2G6 241 aaKnown RBP8.25□□□□□ -1.09
C9orf85-202ENST00000377027 TRIML2Q8N7C3 387 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 POMGNT2Q8NAT1 580 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 GTF2H4Q92759 462 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 RCC1LQ96I51 464 aaKnown RBP8.25□□□□□ -1.09
C9orf85-202ENST00000377027 ZNF75AQ96N20 296 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 FOXN4Q96NZ1 517 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 KATNB1Q9BVA0 655 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 SPATA9Q9BWV2 254 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 LINC00470Q9BZP3 86 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 BPESC1Q9GZL8 116 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 PLK3Q9H4B4 646 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 PIF1Q9H611 641 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 FKRPQ9H9S5 495 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 KCNK9Q9NPC2 374 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 SLC52A3Q9NQ40 469 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 SDR39U1Q9NRG7 319 aaPredicted RBP8.25□□□□□ -1.09
C9orf85-202ENST00000377027 SLC25A37Q9NYZ2 338 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 P2RX2Q9UBL9 471 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 RAB21Q9UL25 225 aa8.25□□□□□ -1.09
C9orf85-202ENST00000377027 TMEM120BA0PK00 339 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 RPL36A-HNRNPH2H7BZ11 118 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 TRAF3IP2O43734 574 aaPredicted RBP8.24□□□□□ -1.09
C9orf85-202ENST00000377027 LMX1BO60663 402 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 TPST2O60704 377 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 SEC14L2O76054 403 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 HPRP00739 348 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 IFNA2P01563 188 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 HLA-DOBP13765 273 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 CRATP43155 626 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 RPS5P46782 204 aaKnown RBP8.24□□□□□ -1.09
C9orf85-202ENST00000377027 CRISP3P54108 245 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 TXNL4AP83876 142 aaKnown RBP8.24□□□□□ -1.09
C9orf85-202ENST00000377027 ROR2Q01974 943 aaKnown RBP8.24□□□□□ -1.09
C9orf85-202ENST00000377027 TGFBR3Q03167 851 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 EFNB3Q15768 340 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 FXNQ16595 210 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 ZSWIM7Q19AV6 140 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 FAM120AOSQ5T036 256 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 PRAMEF8Q5VWM4 474 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 PRAMEF7Q5VXH5 474 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 SLC2A7Q6PXP3 512 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 C6orf89Q6UWU4 347 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 FUNDC1Q8IVP5 155 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 ZNF440Q8IYI8 595 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 TMEM123Q8N131 208 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 GLB1L3Q8NCI6 653 aaPredicted RBP8.24□□□□□ -1.09
C9orf85-202ENST00000377027 MFSD8Q8NHS3 518 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 MAGEE2Q8TD90 523 aaPredicted RBP8.24□□□□□ -1.09
C9orf85-202ENST00000377027 MGARPQ8TDB4 240 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 TAAR8Q969N4 342 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 PAIP2Q9BPZ3 127 aaKnown RBP8.24□□□□□ -1.09
C9orf85-202ENST00000377027 CENPHQ9H3R5 247 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 IKZF5Q9H5V7 419 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 CHODLQ9H9P2 273 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 FAM53CQ9NYF3 392 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 ZNF224Q9NZL3 707 aa8.24□□□□□ -1.09
C9orf85-202ENST00000377027 CGGBP1Q9UFW8 167 aaPredicted RBP8.24□□□□□ -1.09
C9orf85-202ENST00000377027 TRBV5-3A0A0A0MS03 114 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 IGHV2OR16-5A0A0B4J2B6 119 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 LRP5LA4QPB2 252 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 B2RBV5 119 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 ZNF587BE7ETH6 402 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 MS4A18H0YCH9 400 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 TPST1O60507 370 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 SLC22A3O75751 556 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 PDE5AO76074 875 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 KRT75O95678 551 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 IL6P05231 212 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 CSF3P09919 207 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 OR4A8P0C604 315 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 IDO1P14902 403 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 THBS4P35443 961 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 SERPINF1P36955 418 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 PDLIM4P50479 330 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 CLDN17P56750 224 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 ARF1P84077 181 aaKnown RBP8.23□□□□□ -1.09
C9orf85-202ENST00000377027 CHRNB3Q05901 458 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 LRRC74AQ0VAA2 488 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 RGNQ15493 299 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 MS4A18Q3C1V0 323 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 C3orf36Q3SXR2 165 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 C1QTNF12Q5T7M4 302 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 ATG16L1Q676U5 607 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 TMEM225Q6GV28 225 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 CDK20Q8IZL9 346 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 NUP37Q8NFH4 326 aa8.23□□□□□ -1.09
C9orf85-202ENST00000377027 TMEM158Q8WZ71 300 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms