RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 COMMD9Q9P000 198 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 NOP16Q9Y3C1 178 aaKnown RBP10.17□□□□□ -0.78
HDAC6-203ENST00000376619 RBM7Q9Y580 266 aaKnown RBP10.17□□□□□ -0.78
HDAC6-203ENST00000376619 TMED7-TICAM2A0A0A6YYA0 188 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 IGHV1OR15-9A0A0B4J2B8 117 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 A0A1W2PQ72 361 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 OR6C68A6NDL8 312 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 TBXA2RP21731 343 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 STOMP27105 288 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 PRPS1P60891 318 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 INPP5JQ15735 1006 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-203ENST00000376619 PRTGQ2VWP7 1150 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 RPL13AP3Q6NVV1 102 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 KCTD18Q6PI47 426 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-203ENST00000376619 SSX6Q7RTT6 188 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 MDGA2Q7Z553 956 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 ASCC1Q8N9N2 400 aaKnown RBP10.17□□□□□ -0.78
HDAC6-203ENST00000376619 TEX19Q8NA77 164 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 SMRP1Q8NCR6 262 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 OR13C9Q8NGT0 318 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 ZPLD1Q8TCW7 415 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 LYRM4Q9HD34 91 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 IL20Q9NYY1 176 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 SIGLEC7Q9Y286 467 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 TMED7Q9Y3B3 224 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 ALG5Q9Y673 324 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 PIEZO1Q92508 2521 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 PDCD5O14737 125 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 TRIM3O75382 744 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-203ENST00000376619 CSF3P09919 207 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 IFNGR1P15260 489 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 SPI1P17947 270 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 PRKCDQ05655 676 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 FMODQ06828 376 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 COL28A1Q2UY09 1125 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 C11orf91Q3C1V1 193 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 CDNFQ49AH0 187 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 GDPGP1Q6ZNW5 385 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 VASH1Q7L8A9 365 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-203ENST00000376619 OR4D9Q8NGE8 314 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 OR1L3Q8NH93 324 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 AUNIPQ9H7T9 357 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 LIN7BQ9HAP6 207 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 CMC2Q9NRP2 79 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 NDUFB11Q9NX14 153 aa10.17□□□□□ -0.78
HDAC6-203ENST00000376619 TSC2P49815 1807 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 METTL12A8MUP2 240 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 ZNF878C9JN71 531 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 SULT2B1O00204 365 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 EIF4EP06730 217 aaKnown RBP10.16□□□□□ -0.78
HDAC6-203ENST00000376619 CD14P08571 375 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 H2AFB2P0C5Z0 115 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 DNASE1P24855 282 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 LTBRP36941 435 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 HTR2BP41595 481 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 PSMA6P60900 246 aaKnown RBP10.16□□□□□ -0.78
HDAC6-203ENST00000376619 ACKR1Q16570 336 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 SLC22A6Q4U2R8 563 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 ZNF628Q5EBL2 1059 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 C12orf73Q69YU5 71 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 ABHD12BQ7Z5M8 362 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-203ENST00000376619 ZNF227Q86WZ6 799 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 GDPD1Q8N9F7 314 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 ZNF486Q96H40 463 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-203ENST00000376619 DOK1Q99704 481 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 MGAT4CQ9UBM8 478 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 CES1P1Q9UKY3 287 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 MGAT4AQ9UM21 535 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 PCDHGA3Q9Y5H0 932 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 SIRT4Q9Y6E7 314 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-203ENST00000376619 CFAP54Q96N23 3096 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 I3L521 148 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 DLL1O00548 723 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 OR2J2O76002 312 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 KDM4BO94953 1096 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 IGKV1D-16P01601 117 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 ITGA3P26006 1051 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 BIDP55957 195 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 ACTA2P62736 377 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 ACTG2P63267 376 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 APOOLQ6UXV4 268 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 GALNT11Q8NCW6 608 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 ANKRD9Q96BM1 317 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-203ENST00000376619 ARHGAP9Q9BRR9 750 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 ZNF350Q9GZX5 532 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 EMC7Q9NPA0 242 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 ZNF701Q9NV72 531 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-203ENST00000376619 CCDC59Q9P031 241 aaKnown RBP10.16□□□□□ -0.78
HDAC6-203ENST00000376619 A0A1B0GVI7 797 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 P2RY10O00398 339 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 TLX3O43711 291 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-203ENST00000376619 ZIC2O95409 532 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-203ENST00000376619 OR3A3P47888 321 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 OR3A2P47893 321 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 ART1P52961 327 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 CDK5Q00535 292 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 LINC00696Q6ZRV3 163 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 SIAH3Q8IW03 269 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 OR14L1PQ8NHC6 308 aa10.16□□□□□ -0.78
HDAC6-203ENST00000376619 NR4A3Q92570 626 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms