RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 Q6ZTK2 550 aa10.65□□□□□ -0.71
PTCH1-203ENST00000375274 NLGN4YQ8NFZ3 816 aaPredicted RBP10.65□□□□□ -0.71
PTCH1-203ENST00000375274 OR51Q1Q8NH59 317 aa10.65□□□□□ -0.71
PTCH1-203ENST00000375274 FAM3CQ92520 227 aa10.65□□□□□ -0.71
PTCH1-203ENST00000375274 TOE1Q96GM8 510 aaKnown RBP10.65□□□□□ -0.71
PTCH1-203ENST00000375274 SENP5Q96HI0 755 aaPredicted RBP10.65□□□□□ -0.71
PTCH1-203ENST00000375274 CHRDQ9H2X0 955 aa10.65□□□□□ -0.71
PTCH1-203ENST00000375274 STEAP1Q9UHE8 339 aa10.65□□□□□ -0.71
PTCH1-203ENST00000375274 CDK5RAP2Q96SN8 1893 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 A0A0B4J2A0 478 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 CNOT4O95628 575 aaKnown RBP10.64□□□□□ -0.71
PTCH1-203ENST00000375274 SPNP16150 400 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 SOX18P35713 384 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 CSNK1A1P48729 337 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 CX3CR1P49238 355 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 CLDN20P56880 219 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 TAS2R20P59543 309 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 MED25Q71SY5 747 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 OVCH1Q7RTY7 1134 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 MFSD4AQ8N468 514 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 IL17RCQ8NAC3 791 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 TMEM59Q9BXS4 323 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 FGF20Q9NP95 211 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-203ENST00000375274 LRFN1Q9P244 771 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 SHPKQ9UHJ6 478 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 KNTC1P50748 2209 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 M0QYG6 137 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 MED6O75586 246 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 PMS2P2O95744 297 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 IGHG1P01857 330 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 RAF1P04049 648 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 SERPINE2P07093 398 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 IFNGR1P15260 489 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 ANXA7P20073 488 aaKnown RBP10.64□□□□□ -0.71
PTCH1-203ENST00000375274 TRHRP34981 398 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-203ENST00000375274 KIR2DL3P43628 341 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 LIM2P55344 173 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 YPEL5P62699 121 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 B4GALNT1Q00973 533 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 BCL2A1Q16548 175 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 EIF2S3LQ2VIR3 472 aaKnown RBP10.64□□□□□ -0.71
PTCH1-203ENST00000375274 SYT9Q86SS6 491 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 FRMD1Q8N878 549 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 PXT1Q8NFP0 134 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 SCARB1Q8WTV0 552 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 C1orf198Q9H425 327 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 ACOXLQ9NUZ1 547 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 B4GALT7Q9UBV7 327 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 C19orf53Q9UNZ5 99 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-203ENST00000375274 SRPK3Q9UPE1 567 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 FAM230AA0A1W2PPH8 454 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 A0A1W2PS29 197 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 TOR1AO14656 332 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 NUDT21O43809 227 aaKnown RBP10.64□□□□□ -0.71
PTCH1-203ENST00000375274 GALR3O60755 368 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-203ENST00000375274 JMJD7P0C870 316 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 CD53P19397 219 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 SERPINA2P20848 420 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 BSGP35613 385 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 TAGLNQ01995 201 aaKnown RBP10.64□□□□□ -0.71
PTCH1-203ENST00000375274 DPTQ07507 201 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 ESPNLQ6ZVH7 1005 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 TECPR1Q7Z6L1 1165 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 LILRB2Q8N423 598 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 BBS1Q8NFJ9 593 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 STACQ99469 402 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 PLEKHM1Q9Y4G2 1056 aa10.64□□□□□ -0.71
PTCH1-203ENST00000375274 MN1Q10571 1320 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-203ENST00000375274 AKR7A2O43488 359 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 FOSL2P15408 326 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 IDH3GP51553 393 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-203ENST00000375274 BDH1Q02338 343 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 IHHQ14623 411 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 ZNF169Q14929 603 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-203ENST00000375274 TANGO2Q6ICL3 276 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 RAB11FIP2Q7L804 512 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 PLPP7Q8NBV4 271 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 ZNF680Q8NEM1 530 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 OR51S1Q8NGJ8 323 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 OR6M1Q8NGM8 313 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 NUDT22Q9BRQ3 303 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 MED18Q9BUE0 208 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 SLC38A1Q9H2H9 487 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 LUZP4Q9P127 313 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 THAP10Q9P2Z0 257 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-203ENST00000375274 GPR55Q9Y2T6 319 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-203ENST00000375274 EMC9Q9Y3B6 208 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 hCG_1807616A0A1W2PRN6 198 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 HCRTR1O43613 425 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 GIPP09681 153 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-203ENST00000375274 MSL3P1P0C860 447 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 ALDH3B1P43353 468 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 PER3P56645 1201 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 ZP2Q05996 745 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 ADIPOR2Q86V24 386 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 KLHDC8BQ8IXV7 354 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 ZNF611Q8N823 705 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 C19orf47Q8N9M1 422 aaKnown RBP10.63□□□□□ -0.71
PTCH1-203ENST00000375274 OR14L1PQ8NHC6 308 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 RAB3CQ96E17 227 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms