RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 USP53Q70EK8 1073 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 MAMDC2Q7Z304 686 aaPredicted RBP6.15□□□□□ -1.42
UBR4-204ENST00000375254 LYG2Q86SG7 212 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 CHST14Q8NCH0 376 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 HGDQ93099 445 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 CUTCQ9NTM9 273 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 TRAV36DV7A0A075B6V5 113 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 ARAFP10398 606 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 ERV3-1Q14264 604 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 EXT1Q16394 746 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 DGAT2L6Q6ZPD8 337 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 LCN9Q8WX39 176 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 TMEM169Q96HH4 297 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 GABARAPL1Q9H0R8 117 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 DRGXA6NNA5 263 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 ZNF250P15622 560 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 TSFMP43897 325 aaKnown RBP6.15□□□□□ -1.42
UBR4-204ENST00000375254 BEX5Q5H9J7 111 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 SLC22A24Q8N4F4 322 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 PPP1R35Q8TAP8 253 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 ZBTB45Q96K62 511 aaPredicted RBP6.15□□□□□ -1.42
UBR4-204ENST00000375254 RHCGQ9UBD6 479 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 SOX1O00570 391 aaPredicted RBP6.15□□□□□ -1.42
UBR4-204ENST00000375254 PTHP01270 115 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 HIST1H1CP16403 213 aaKnown RBP6.15□□□□□ -1.42
UBR4-204ENST00000375254 SRP14P37108 136 aaKnown RBP6.15□□□□□ -1.42
UBR4-204ENST00000375254 DSC2Q02487 901 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 SLC14A2Q15849 920 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 ZNF761Q86XN6 746 aaPredicted RBP6.15□□□□□ -1.42
UBR4-204ENST00000375254 APH1AQ96BI3 265 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 WIPI2Q9Y4P8 454 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 ACKR3P25106 362 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 DGAT2Q96PD7 388 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 NTMT1Q9BV86 223 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 Q9N2K0 584 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 PRDM7Q9NQW5 492 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 B3GALT5Q9Y2C3 310 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 KCNK7Q9Y2U2 307 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 A0A0G2JLW4 131 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 ST6GAL1P15907 406 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 GLB1P16278 677 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 OPRD1P41143 372 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 SLC6A8P48029 635 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 Q6ZRG5 221 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 SLC16A12Q6ZSM3 486 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 OR6K2Q8NGY2 324 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 OR6N2Q8NGY6 317 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 SH3RF2Q8TEC5 729 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 MAP1LC3CQ9BXW4 147 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 ARHGEF11O15085 1522 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 NUP153P49790 1475 aaKnown RBP6.15□□□□□ -1.43
UBR4-204ENST00000375254 ADPRHP54922 357 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 ZCCHC14Q8WYQ9 949 aaKnown RBP6.15□□□□□ -1.43
UBR4-204ENST00000375254 HMCESQ96FZ2 354 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 SRMSQ9H3Y6 488 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 MFSD4AQ8N468 514 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 GABRA1P14867 456 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 IRS1P35568 1242 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 ACTR1BP42025 376 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 RPL7L1Q6DKI1 246 aaKnown RBP6.15□□□□□ -1.43
UBR4-204ENST00000375254 C9orf62Q8N4C0 152 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 DCBLD1Q8N8Z6 715 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 OR4S1Q8NGB4 309 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 GRHL3Q8TE85 626 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 PHPT1Q9NRX4 125 aaPredicted RBP6.15□□□□□ -1.43
UBR4-204ENST00000375254 OR14J1Q9UGF5 321 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 CHST2Q9Y4C5 530 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 KDM6BO15054 1643 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 TBC1D3EA0A087X179 549 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 BLACEA4D250 179 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 PODNL1Q6PEZ8 512 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 TMEM220Q6QAJ8 160 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 FBXW12Q6X9E4 464 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 OR10Q1Q8NGQ4 319 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 OR5AC2Q9NZP5 309 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 NAT8BQ9UHF3 227 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 SYT5O00445 386 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 MBPP02686 304 aaPredicted RBP6.15□□□□□ -1.43
UBR4-204ENST00000375254 TYMSP04818 313 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 NDUFB7P17568 137 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 GJA4P35212 333 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 NPBWR1P48145 328 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 OR52I1Q8NGK6 324 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 OR6N1Q8NGY5 312 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 OR13G1Q8NGZ3 307 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 OR2AE1Q8NHA4 323 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 B4GALT6Q9UBX8 382 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 LHX6Q9UPM6 363 aa6.15□□□□□ -1.43
UBR4-204ENST00000375254 PRAMEF11O60813 436 aa6.14□□□□□ -1.43
UBR4-204ENST00000375254 TMEM225BP0DP42 221 aa6.14□□□□□ -1.43
UBR4-204ENST00000375254 HNRNPA2B1P22626 353 aaKnown RBP6.14□□□□□ -1.43
UBR4-204ENST00000375254 GCH1P30793 250 aa6.14□□□□□ -1.43
UBR4-204ENST00000375254 CASP9P55211 416 aa6.14□□□□□ -1.43
UBR4-204ENST00000375254 NCBP2-AS2Q69YL0 99 aa6.14□□□□□ -1.43
UBR4-204ENST00000375254 DHRS7BQ6IAN0 325 aaPredicted RBP6.14□□□□□ -1.43
UBR4-204ENST00000375254 CERS5Q8N5B7 392 aa6.14□□□□□ -1.43
UBR4-204ENST00000375254 ZFP41Q8N8Y5 198 aa6.14□□□□□ -1.43
UBR4-204ENST00000375254 PLSCR3Q9NRY6 295 aa6.14□□□□□ -1.43
UBR4-204ENST00000375254 C7orf77A4D0Y5 90 aa6.14□□□□□ -1.43
UBR4-204ENST00000375254 NUDT3O95989 172 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms