RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 DPPA2Q7Z7J5 298 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 KLBQ86Z14 1044 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 FAM98AQ8NCA5 519 aaKnown RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 OR10H4Q8NGA5 316 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 ZNF721Q8TF20 911 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 ZNF431Q8TF32 576 aaPredicted RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 CDX2Q99626 313 aaPredicted RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 BARHL1Q9BZE3 327 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 LAT2Q9GZY6 243 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 NXF5Q9H1B4 397 aaKnown RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 MMP28Q9H239 520 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 MED20Q9H944 212 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 FGF21Q9NSA1 209 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 DHCR7Q9UBM7 475 aaKnown RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 ATXN7L1Q9ULK2 861 aaPredicted RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 SLC6A5Q9Y345 797 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 CASKO14936 926 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 ARPC3O15145 178 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 TO15178 435 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 TNRC18O15417 2968 aaPredicted RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 HYAL3O43820 417 aaPredicted RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 DDAH2O95865 285 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 IFNA4P05014 189 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 NGFRP08138 427 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 RRASP10301 218 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 FOLR1P15328 257 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 TMEM11P17152 192 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 SLC2A5P22732 501 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 SDC2P34741 201 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 RPL4P36578 427 aaKnown RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 FABP5Q01469 135 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 CFHR1Q03591 330 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 MXD1Q05195 221 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 ZP2Q05996 745 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 SCN1BQ07699 218 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 HNRNPA0Q13151 305 aaKnown RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 SQSTM1Q13501 440 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 CRMP1Q14194 572 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 NSDHLQ15738 373 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 SLC35D3Q5M8T2 416 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 POMGNT2Q8NAT1 580 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 ZSCAN1Q8NBB4 408 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 PLPP5Q8NEB5 264 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 TSLPQ969D9 159 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 ADIPOR1Q96A54 375 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 ZNF501Q96CX3 271 aaPredicted RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 CHRNA9Q9UGM1 479 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 PCDHGB2Q9Y5G2 931 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 FKBP7Q9Y680 259 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 A0A0A6YYJ9 748 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 A0A1W2PQD3 144 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 REM1O75628 298 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 RGS9O75916 674 aaPredicted RBP7.49□□□□□ -1.21
UBR4-202ENST00000375224 DCNP07585 359 aaKnown RBP7.49□□□□□ -1.21
UBR4-202ENST00000375224 PTAFRP25105 342 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 CSF2RBP32927 897 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 GABREP78334 506 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 SKP2Q13309 424 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 CLLU1Q5K131 121 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 MZT2AQ6P582 158 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 CHMP1BQ7LBR1 199 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 RABEPKQ7Z6M1 372 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 MARCH9Q86YJ5 346 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 OR52E2Q8NGJ4 325 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 OR5M3Q8NGP4 307 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.49□□□□□ -1.21
UBR4-202ENST00000375224 LIPHQ8WWY8 451 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 SMPDL3BQ92485 455 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 KISS1RQ969F8 398 aaPredicted RBP7.49□□□□□ -1.21
UBR4-202ENST00000375224 MIOXQ9UGB7 285 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 EML5Q05BV3 1969 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 GABRPO00591 440 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 TERTO14746 1132 aaKnown RBP7.49□□□□□ -1.21
UBR4-202ENST00000375224 RNF13O43567 381 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 EIF4E2O60573 245 aaKnown RBP7.49□□□□□ -1.21
UBR4-202ENST00000375224 SMIM6P0DI80 62 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 GIMD1P0DJR0 217 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 CCR4P51679 360 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 FHL1Q13642 323 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 ALKBH1Q13686 389 aaKnown RBP7.49□□□□□ -1.21
UBR4-202ENST00000375224 NR0B2Q15466 257 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 ATG4DQ86TL0 474 aaPredicted RBP7.49□□□□□ -1.21
UBR4-202ENST00000375224 LIX1LQ8IVB5 337 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 ARIH2OSQ8N7S6 290 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 C17orf47Q8NEP4 570 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 OR1N1Q8NGS0 311 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 CCDC74AQ96AQ1 378 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 GAL3ST4Q96RP7 486 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 GPX7Q96SL4 187 aaPredicted RBP7.49□□□□□ -1.21
UBR4-202ENST00000375224 KATNB1Q9BVA0 655 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 TMED9Q9BVK6 235 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 DPCDQ9BVM2 203 aaPredicted RBP7.49□□□□□ -1.21
UBR4-202ENST00000375224 RERGLQ9H628 205 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 CRLF2Q9HC73 371 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 MCUBQ9NWR8 336 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 MAB21L2Q9Y586 359 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 IER3IP1Q9Y5U9 82 aa7.49□□□□□ -1.21
UBR4-202ENST00000375224 COL5A1P20908 1838 aaPredicted RBP7.49□□□□□ -1.21
UBR4-202ENST00000375224 TRABD2BA6NFA1 517 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 IMPA2O14732 288 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms