RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 HPRP00739 348 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 MAKP20794 623 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 SSTR5P35346 364 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 MRPS10P82664 201 aaKnown RBP7.24□□□□□ -1.25
USP48-203ENST00000374732 HSF1Q00613 529 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 SLC6A3Q01959 620 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 FAAP100Q0VG06 881 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 TPBGQ13641 420 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 FGFBP1Q14512 234 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 SLC10A1Q14973 349 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 ITPRIPL2Q3MIP1 535 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 ACSM3Q53FZ2 586 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 DNLZQ5SXM8 178 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 HENMT1Q5T8I9 393 aaKnown RBP7.24□□□□□ -1.25
USP48-203ENST00000374732 IER5Q5VY09 327 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 CGB2Q6NT52 195 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 SLC27A1Q6PCB7 646 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 TMEM205Q6UW68 189 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 PRRT2Q7Z6L0 340 aaPredicted RBP7.24□□□□□ -1.25
USP48-203ENST00000374732 VRK3Q8IV63 474 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 TEX26Q8N6G2 289 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 PRELID2Q8N945 189 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 OR9G4Q8NGQ1 327 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 FAM110DQ8TAY7 271 aaPredicted RBP7.24□□□□□ -1.25
USP48-203ENST00000374732 GPR137Q96N19 417 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 INSM2Q96T92 566 aaPredicted RBP7.24□□□□□ -1.25
USP48-203ENST00000374732 FMO2Q99518 471 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 FAM96AQ9H5X1 160 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 CACYBPQ9HB71 228 aaKnown RBP7.24□□□□□ -1.25
USP48-203ENST00000374732 DDIT4Q9NX09 232 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 SLC17A6Q9P2U8 582 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 IGKV6-21A0A0C4DH24 114 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 K7ERU9 68 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 CDIPTO14735 213 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 JCHAINP01591 159 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 ITGB2P05107 769 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 ELAVL4P26378 380 aaKnown RBP7.23□□□□□ -1.25
USP48-203ENST00000374732 BSGP35613 385 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 SLC6A11P48066 632 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 SLC16A1P53985 500 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 ERVFRD-1P60508 538 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 VGLL4Q14135 290 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 VMACQ2NL98 169 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 TMEM211Q6ICI0 200 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 FAM45BPQ6NSW5 357 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 RHBDD2Q6NTF9 364 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 KIRREL2Q6UWL6 708 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 CBLN2Q8IUK8 224 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 PACRGLQ8N7B6 248 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 CDRT4Q8N9R6 151 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 WBP2Q969T9 261 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 GAL3ST3Q96A11 431 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 RPUSD4Q96CM3 377 aaKnown RBP7.23□□□□□ -1.25
USP48-203ENST00000374732 Q96MT0 163 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 DPCDQ9BVM2 203 aaPredicted RBP7.23□□□□□ -1.25
USP48-203ENST00000374732 MAP1LC3CQ9BXW4 147 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 BARHL1Q9BZE3 327 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 WWTR1Q9GZV5 400 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 CRISPLD1Q9H336 500 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 HRH4Q9H3N8 390 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 PRSS16Q9NQE7 514 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 FBXL12Q9NXK8 326 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.23□□□□□ -1.25
USP48-203ENST00000374732 A0A087X1B8 175 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 KLRC2P26717 231 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 SOX2P48431 317 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 EGR4Q05215 589 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 PPP1R8Q12972 351 aaKnown RBP7.23□□□□□ -1.25
USP48-203ENST00000374732 GNMTQ14749 295 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 SIX1Q15475 284 aaPredicted RBP7.23□□□□□ -1.25
USP48-203ENST00000374732 PYCR3Q53H96 274 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 OGFRL1Q5TC84 451 aaPredicted RBP7.23□□□□□ -1.25
USP48-203ENST00000374732 MBLAC2Q68D91 279 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 ZNF774Q6NX45 483 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 FAM183BPQ6ZVS7 135 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 AHSA2Q719I0 299 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 C10orf107Q8IVU9 208 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 LGI4Q8N135 537 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 OR56A1Q8NGH5 318 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 TCTN2Q96GX1 697 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 MSTO1Q9BUK6 570 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 GPR174Q9BXC1 333 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 KIF25Q9UIL4 384 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 ZNF346Q9UL40 294 aaKnown RBP7.23□□□□□ -1.25
USP48-203ENST00000374732 BTBD3Q9Y2F9 522 aa7.23□□□□□ -1.25
USP48-203ENST00000374732 PPIAL4EA0A075B759 164 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 PPIAL4CA0A0B4J2A2 164 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 A0A1W2PPE3 182 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 LRIT2A6NDA9 550 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 ANTXRLA6NF34 631 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 METTL12A8MUP2 240 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 PPIAL4DF5H284 164 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 RNASEK-C17orf49H0YIS7 233 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 COPEO14579 308 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 GJB5O95377 273 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 SERPINE2P07093 398 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 ANXA2P07355 339 aaKnown RBP7.22□□□□□ -1.25
USP48-203ENST00000374732 PPIAL4FP0DN26 164 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 EGR1P18146 543 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 PPT1P50897 306 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms