RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ZNF417Q8TAU3 575 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 SNRNP27Q8WVK2 155 aaKnown RBP17.69■□□□□ 0.42
HDAC1-201ENST00000373548 SPACA9Q96E40 222 aaPredicted RBP17.69■□□□□ 0.42
HDAC1-201ENST00000373548 ZNF587Q96SQ5 575 aaPredicted RBP17.69■□□□□ 0.42
HDAC1-201ENST00000373548 ZNF700Q9H0M5 742 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 WDR70Q9NW82 654 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 LNP1A1A4G5 178 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 B4E171 279 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 PLPP3O14495 311 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 OR2T1O43869 369 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 COX6A1P12074 109 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 SHC1P29353 583 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 TSPAN7P41732 249 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 BCAP31P51572 246 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 FOXF1Q12946 379 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 ACKR1Q16570 336 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 ZNF684Q5T5D7 378 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 EEF1A1P5Q5VTE0 462 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 CEACAM19Q7Z692 300 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 PXKQ7Z7A4 578 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 PM20D2Q8IYS1 436 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 POC5Q8NA72 575 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 OR13C5Q8NGS8 318 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 ZNF519Q8TB69 540 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 SMIM19Q96E16 107 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 MRPL48Q96GC5 212 aaKnown RBP17.68■□□□□ 0.42
HDAC1-201ENST00000373548 IMMP1LQ96LU5 166 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 METTL7AQ9H8H3 244 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 C14orf119Q9NWQ9 140 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 KLHDC2Q9Y2U9 406 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 WIF1Q9Y5W5 379 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 HS3ST3B1Q9Y662 390 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 IGLV3-32A0A0A0MS00 114 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 A0A1W2PRG6 482 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 FLRT2O43155 660 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 IL11P20809 199 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 APOBEC1P41238 236 aaKnown RBP17.68■□□□□ 0.42
HDAC1-201ENST00000373548 GDI2P50395 445 aaKnown RBP17.68■□□□□ 0.42
HDAC1-201ENST00000373548 RPL27P61353 136 aaKnown RBP17.68■□□□□ 0.42
HDAC1-201ENST00000373548 GLYR1Q49A26 553 aaPredicted RBP17.68■□□□□ 0.42
HDAC1-201ENST00000373548 MS4A15Q8N5U1 240 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 ARL5BQ96KC2 179 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 SRRQ9GZT4 340 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 MRPL39Q9NYK5 338 aaKnown RBP17.68■□□□□ 0.42
HDAC1-201ENST00000373548 COMMD3Q9UBI1 195 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 B3GALT1Q9Y5Z6 326 aa17.68■□□□□ 0.42
HDAC1-201ENST00000373548 EML6Q6ZMW3 1958 aa17.67■□□□□ 0.42
HDAC1-201ENST00000373548 TVP23AA6NH52 213 aa17.67■□□□□ 0.42
HDAC1-201ENST00000373548 ETV2O00321 342 aaPredicted RBP17.67■□□□□ 0.42
HDAC1-201ENST00000373548 MSX1P28360 303 aa17.67■□□□□ 0.42
HDAC1-201ENST00000373548 PSMB10P40306 273 aa17.67■□□□□ 0.42
HDAC1-201ENST00000373548 ACSM3Q53FZ2 586 aa17.67■□□□□ 0.42
HDAC1-201ENST00000373548 RPL22L1Q6P5R6 122 aaKnown RBP17.67■□□□□ 0.42
HDAC1-201ENST00000373548 OR2Y1Q8NGV0 311 aa17.67■□□□□ 0.42
HDAC1-201ENST00000373548 OR6S1Q8NH40 331 aa17.67■□□□□ 0.42
HDAC1-201ENST00000373548 DIRAS2Q96HU8 199 aa17.67■□□□□ 0.42
HDAC1-201ENST00000373548 CMKLR1Q99788 373 aa17.67■□□□□ 0.42
HDAC1-201ENST00000373548 TXNIPQ9H3M7 391 aa17.67■□□□□ 0.42
HDAC1-201ENST00000373548 SHISA8B8ZZ34 492 aa17.66■□□□□ 0.42
HDAC1-201ENST00000373548 PSMD9O00233 223 aa17.66■□□□□ 0.42
HDAC1-201ENST00000373548 XKRYO14609 159 aa17.66■□□□□ 0.42
HDAC1-201ENST00000373548 OR6A2O95222 327 aa17.66■□□□□ 0.42
HDAC1-201ENST00000373548 SP140LQ9H930 580 aa17.66■□□□□ 0.42
HDAC1-201ENST00000373548 GPR179Q6PRD1 2367 aa17.66■□□□□ 0.42
HDAC1-201ENST00000373548 ITGA10O75578 1167 aa17.66■□□□□ 0.42
HDAC1-201ENST00000373548 IGHMP01871 453 aa17.66■□□□□ 0.42
HDAC1-201ENST00000373548 EDNRAP25101 427 aa17.66■□□□□ 0.42
HDAC1-201ENST00000373548 AZGP1P25311 298 aaKnown RBP17.66■□□□□ 0.42
HDAC1-201ENST00000373548 CASP3P42574 277 aa17.66■□□□□ 0.42
HDAC1-201ENST00000373548 PPP3R1P63098 170 aa17.66■□□□□ 0.42
HDAC1-201ENST00000373548 INPP5JQ15735 1006 aaPredicted RBP17.66■□□□□ 0.42
HDAC1-201ENST00000373548 CCDC58Q4VC31 144 aa17.66■□□□□ 0.42
HDAC1-201ENST00000373548 FAM131AQ6UXB0 335 aa17.66■□□□□ 0.42
HDAC1-201ENST00000373548 CDC20BQ86Y33 519 aa17.66■□□□□ 0.42
HDAC1-201ENST00000373548 LOXL4Q96JB6 756 aa17.66■□□□□ 0.42
HDAC1-201ENST00000373548 SDHAF3Q9NRP4 125 aa17.66■□□□□ 0.42
HDAC1-201ENST00000373548 TRBV2A0A0J9YWF9 115 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 PRSS37A4D1T9 235 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 ANKRD33BA6NCL7 494 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 AKR7A3O95154 331 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 GPANK1O95872 356 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 CD1AP06126 327 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 CFL1P23528 166 aaKnown RBP17.65■□□□□ 0.42
HDAC1-201ENST00000373548 RPS11P62280 158 aaKnown RBP eCLIP17.65■□□□□ 0.42
HDAC1-201ENST00000373548 EXT1Q16394 746 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 PLPPR5Q32ZL2 321 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 SLC25A53Q5H9E4 307 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 OR8H2Q8N162 312 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 MFSD8Q8NHS3 518 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 RNF166Q96A37 237 aaPredicted RBP17.65■□□□□ 0.42
HDAC1-201ENST00000373548 SNX18Q96RF0 628 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 PCDHGA5Q9Y5G8 931 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 FABP12A6NFH5 140 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 ZNF208O43345 1280 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 EFNA2O43921 213 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 HPGDSO60760 199 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 MYL9P24844 172 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 ZNF41P51814 821 aaPredicted RBP17.65■□□□□ 0.42
HDAC1-201ENST00000373548 CDC20Q12834 499 aa17.65■□□□□ 0.42
HDAC1-201ENST00000373548 OR7A5Q15622 319 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms