RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 MARCH9Q86YJ5 346 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 NPAS3Q8IXF0 933 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 ZNF614Q8N883 585 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 OR51Q1Q8NH59 317 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 OR5R1Q8NH85 324 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 HUS1BQ8NHY5 278 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 ASB13Q8WXK3 278 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 TFGQ92734 400 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-203ENST00000372232 DOCK6Q96HP0 2047 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 ALPK3Q96L96 1907 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 NRIP2Q9BQI9 281 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 GAL3ST2Q9H3Q3 398 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 DNAJC27Q9NZQ0 273 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 CHD7Q9P2D1 2997 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 WNT6Q9Y6F9 365 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 MYOFQ9NZM1 2061 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 TSPAN11A1L157 253 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 RPL36A-HNRNPH2H7BZ11 118 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 TLR4O00206 839 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 GSTZ1O43708 216 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-203ENST00000372232 PRAMEF4O60810 478 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 PMP2P02689 132 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 CTSLP07711 333 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 NR2F6P10588 404 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 MYF5P13349 255 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 NDUFS1P28331 727 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 CHI3L1P36222 383 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-203ENST00000372232 ATP6V1E1P36543 226 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 SUCLG1P53597 346 aaKnown RBP8.11□□□□□ -1.11
ATG4A-203ENST00000372232 MVDP53602 400 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 SHC2P98077 582 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 DGCR2P98153 550 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 SLC5A12Q1EHB4 618 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 NKAPLQ5M9Q1 402 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 IDNKQ5T6J7 187 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 PRAMEF9Q5VWM5 478 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 LPCAT3Q6P1A2 487 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 RANBP3LQ86VV4 465 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-203ENST00000372232 OR52I1Q8NGK6 324 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 HAVCR2Q8TDQ0 301 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 THEM6Q8WUY1 208 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 FOXRED1Q96CU9 486 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-203ENST00000372232 AMDHD1Q96NU7 426 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 IL4I1Q96RQ9 567 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 FAIM2Q9BWQ8 316 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 SEC61A2Q9H9S3 476 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 TREM1Q9NP99 234 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 DNAJB11Q9UBS4 358 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 SH3BGRL2Q9UJC5 107 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 ZDHHC8Q9ULC8 765 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 SLC22A14Q9Y267 594 aa8.11□□□□□ -1.11
ATG4A-203ENST00000372232 DSPPQ9NZW4 1301 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 CCDC187A0A096LP49 1063 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 A6NLC8 198 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 ADARB2-AS1A8MUL3 147 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 ANHXE9PGG2 379 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 F5H5P2 479 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 SCDO00767 359 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 SLCO2B1O94956 709 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 UBL3O95164 117 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 F10P00742 488 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 FGBP02675 491 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 HLA-DPB1P04440 258 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 SRPRAP08240 638 aaKnown RBP8.1□□□□□ -1.11
ATG4A-203ENST00000372232 QDPRP09417 244 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 CPT2P23786 658 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 PRPH2P23942 346 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 H2BFSP57053 126 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 NTHL1P78549 312 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 PITPNAQ00169 270 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 SLC14A1Q13336 389 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 HENMT1Q5T8I9 393 aaKnown RBP8.1□□□□□ -1.11
ATG4A-203ENST00000372232 RAB12Q6IQ22 244 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 JMJD6Q6NYC1 403 aaPredicted RBP8.1□□□□□ -1.11
ATG4A-203ENST00000372232 CAMKMTQ7Z624 323 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 SLC35F3Q8IY50 421 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 OR10D4PQ8NGN7 298 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 OR4A4PQ8NGN8 299 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 RNF141Q8WVD5 230 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 C22orf15Q8WYQ4 148 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 OTUB2Q96DC9 234 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 MRGPRX4Q96LA9 322 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 RIOK2Q9BVS4 552 aaKnown RBP8.1□□□□□ -1.11
ATG4A-203ENST00000372232 OR10A4Q9H209 315 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 TESQ9UGI8 421 aaKnown RBP8.1□□□□□ -1.11
ATG4A-203ENST00000372232 MOKQ9UQ07 419 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 PLXNB3Q9ULL4 1909 aa8.1□□□□□ -1.11
ATG4A-203ENST00000372232 TBC1D3DA0A087WVF3 549 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 TBC1D3IA0A087WXS9 549 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 TBC1D3EA0A087X179 549 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 TBC1D3KA0A087X1G2 549 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 C2orf92A0A1B0GVN3 265 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 TBC1D3FA6NER0 549 aaPredicted RBP8.09□□□□□ -1.11
ATG4A-203ENST00000372232 NAP1L6A6NFF2 107 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 OR2AG2A6NM03 316 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 SEC14L6B5MCN3 397 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 TBC1D3LB9A6J9 549 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 NPIPB8E9PQR5 432 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 GABRPO00591 440 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 ARPC1BO15143 372 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms