RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 STATHP02808 62 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 ATF1P18846 271 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 HIST1H1TP22492 207 aaPredicted RBP10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 SLC2A5P22732 501 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 NFYAP23511 347 aaPredicted RBP10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 VSX2P58304 361 aaPredicted RBP10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 MC2RQ01718 297 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 ZNF85Q03923 595 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 SLC3A1Q07837 685 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 CRYZQ08257 329 aaKnown RBP10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 DUSP8Q13202 625 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 PRAMEF17Q5VTA0 474 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 ZNF793Q6ZN11 406 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 SAMD14Q8IZD0 417 aaPredicted RBP10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 BMPERQ8N8U9 685 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 OR11G2Q8NGC1 345 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 SCARB1Q8WTV0 552 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 TMEM255BQ8WV15 326 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 DACT3Q96B18 629 aaPredicted RBP10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 SMIM19Q96E16 107 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 CNRIP1Q96F85 164 aaPredicted RBP10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 C16orf58Q96GQ5 468 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 C4orf36Q96KX1 117 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 SFXN2Q96NB2 322 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 ZFP3Q96NJ6 502 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 ZFYVE21Q9BQ24 234 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 B3GNT4Q9C0J1 378 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 ADGRL4Q9HBW9 690 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 PRDM7Q9NQW5 492 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 ZC4H2Q9NQZ6 224 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 KLHL1Q9NR64 748 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 STARD5Q9NSY2 213 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 KLHL9Q9P2J3 617 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 RARRES3Q9UL19 164 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 PLCL2Q9UPR0 1127 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 KCNE3Q9Y6H6 103 aa10.46□□□□□ -0.74
TSPAN1-201ENST00000372003 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 A0A1B0GW55 424 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 A0A1W2PR48 441 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 OR2M5A3KFT3 312 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 RIIAD1A6NNX1 92 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 ZNF879B4DU55 563 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 B4E171 279 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 CDC42EP2O14613 210 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 PIP5K1CO60331 668 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 GALR3O60755 368 aaPredicted RBP10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 MTRF1O75570 445 aaKnown RBP10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 MT-ND4P03905 459 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 RAB40ALP0C0E4 278 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 DUX4L2P0CJ85 424 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 DUX4L3P0CJ86 424 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 DUX4L4P0CJ87 422 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 DUX4L5P0CJ88 424 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 DUX4L6P0CJ89 424 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 DUX4L7P0CJ90 424 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 ATXN8OSP0DMR3 200 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 TBXA2RP21731 343 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 CD96P40200 585 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 TSPAN7P41732 249 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 GABRA4P48169 554 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 SELENOPP49908 381 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 MAP2K6P52564 334 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 ARHGAP11BQ3KRB8 267 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 DCAF12Q5T6F0 453 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 ZNF626Q68DY1 528 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 RPL22L1Q6P5R6 122 aaKnown RBP10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 ABHD17CQ6PCB6 329 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 OLIG3Q7RTU3 272 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 PPP1R3BQ86XI6 285 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 AMER3Q8N944 861 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 POMGNT2Q8NAT1 580 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 OR1L3Q8NH93 324 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 ADAMTS15Q8TE58 950 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 RAB40AQ8WXH6 277 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 ST8SIA4Q92187 359 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 SMPDL3BQ92485 455 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 GHSRQ92847 366 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 PTP4A1Q93096 173 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 ZNF501Q96CX3 271 aaPredicted RBP10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 SGTBQ96EQ0 304 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 GIMAP5Q96F15 307 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 TAAR9Q96RI9 348 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 PRSS27Q9BQR3 290 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 YIPF4Q9BSR8 244 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 NRSN2Q9GZP1 204 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 QRSL1Q9H0R6 528 aaKnown RBP10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 SYNPO2LQ9H987 977 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 BRD7Q9NPI1 651 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 NRIP3Q9NQ35 241 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 PRDM9Q9NQV7 894 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 C14orf105Q9NVL8 296 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 PIPOXQ9P0Z9 390 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 DUX4Q9UBX2 424 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 SERTAD3Q9UJW9 196 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 PILRAQ9UKJ1 303 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 SLC7A7Q9UM01 511 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 MSRB2Q9Y3D2 182 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 B3GALT1Q9Y5Z6 326 aa10.45□□□□□ -0.74
TSPAN1-201ENST00000372003 CDHR4A6H8M9 788 aa10.44□□□□□ -0.74
TSPAN1-201ENST00000372003 FAM183AA6NL82 134 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms