RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 RAB19A4D1S5 217 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 PRSS44E7EML9 344 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 H3BUI4 141 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 NUDT21O43809 227 aaKnown RBP14.71□□□□□ -0.05
COL17A1-202ENST00000369733 CFIP05156 583 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 CEBPBP17676 345 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 RABIFP47224 123 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 CSNK1G2P78368 415 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 AKR1C1Q04828 323 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 MFGE8Q08431 387 aaPredicted RBP14.71□□□□□ -0.05
COL17A1-202ENST00000369733 PDZK1IP1Q13113 114 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 YOD1Q5VVQ6 348 aaPredicted RBP14.71□□□□□ -0.05
COL17A1-202ENST00000369733 NIPAL3Q6P499 406 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 CYHR1Q6ZMK1 362 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 ESPNLQ6ZVH7 1005 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 USP53Q70EK8 1073 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 MCATQ8IVS2 390 aaKnown RBP14.71□□□□□ -0.05
COL17A1-202ENST00000369733 PLPP7Q8NBV4 271 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 OR13C9Q8NGT0 318 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 NXF5Q9H1B4 397 aaKnown RBP14.71□□□□□ -0.05
COL17A1-202ENST00000369733 SLC25A19Q9HC21 320 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 SLC5A10A0PJK1 596 aa14.71□□□□□ -0.06
COL17A1-202ENST00000369733 PRSS38A1L453 326 aa14.71□□□□□ -0.06
COL17A1-202ENST00000369733 SERINC4A6NH21 518 aa14.71□□□□□ -0.06
COL17A1-202ENST00000369733 ATG12O94817 140 aa14.71□□□□□ -0.06
COL17A1-202ENST00000369733 MRPL19P49406 292 aaKnown RBP14.71□□□□□ -0.06
COL17A1-202ENST00000369733 PYCR3Q53H96 274 aa14.71□□□□□ -0.06
COL17A1-202ENST00000369733 EXOSC6Q5RKV6 272 aaKnown RBP14.71□□□□□ -0.06
COL17A1-202ENST00000369733 GLYATL3Q5SZD4 288 aa14.71□□□□□ -0.06
COL17A1-202ENST00000369733 BBS1Q8NFJ9 593 aa14.71□□□□□ -0.06
COL17A1-202ENST00000369733 OR56B1Q8NGI3 324 aa14.71□□□□□ -0.06
COL17A1-202ENST00000369733 DOCK2Q92608 1830 aa14.71□□□□□ -0.06
COL17A1-202ENST00000369733 A0A0U1RQK1 487 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 TMEM200CA6NKL6 621 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 H0YGG7 62 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 LGALS8O00214 317 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 BRINP1O60477 761 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 APEHP13798 732 aaKnown RBP14.7□□□□□ -0.06
COL17A1-202ENST00000369733 ABHD17CQ6PCB6 329 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 SLC43A2Q8N370 569 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 OR10Z1Q8NGY1 313 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 MR1Q95460 341 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 C10orf90Q96M02 699 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 CA5BQ9Y2D0 317 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 ZNF264O43296 627 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 HRO43593 1189 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 DOK2O60496 412 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 GLCEO94923 617 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 NAGAP17050 411 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 CD79BP40259 229 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 BCL6P41182 706 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 BDH1Q02338 343 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 MPEG1Q2M385 716 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 HIST2H3PS2Q5TEC6 136 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 MDGA2Q7Z553 956 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 ADGRE4PQ86SQ3 457 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 FAM213BQ8TBF2 198 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 TBC1D20Q96BZ9 403 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 C14orf79Q96F83 325 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 SELENOIQ9C0D9 397 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 FGF20Q9NP95 211 aaPredicted RBP14.7□□□□□ -0.06
COL17A1-202ENST00000369733 SCML1Q9UN30 329 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 NTNG1Q9Y2I2 539 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 ARAP2Q8WZ64 1704 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 SEC14L5O43304 696 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 PMP2P02689 132 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 ITGB2P05107 769 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 ERV3-1Q14264 604 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 STK11Q15831 433 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 CMIPQ8IY22 773 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 OR52A5Q9H2C5 316 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 NIT2Q9NQR4 276 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 F3P13726 295 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 POU3F1Q03052 451 aaPredicted RBP14.7□□□□□ -0.06
COL17A1-202ENST00000369733 ACSM1Q08AH1 577 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 SLC30A7Q8NEW0 376 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 TMEM59Q9BXS4 323 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 ZNF629Q9UEG4 869 aaPredicted RBP14.7□□□□□ -0.06
COL17A1-202ENST00000369733 GPR55Q9Y2T6 319 aaPredicted RBP14.7□□□□□ -0.06
COL17A1-202ENST00000369733 ADAM18Q9Y3Q7 739 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 ITGB4P16144 1822 aa14.7□□□□□ -0.06
COL17A1-202ENST00000369733 LOXHD1Q8IVV2 1947 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 A0A0B4J203 849 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 FOSL1P15407 271 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 TACR3P29371 465 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 CTBSQ01459 385 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 OR10A5Q9H207 317 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 OR10A2Q9H208 303 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 TUBAL3A6NHL2 446 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 CD300LBA8K4G0 201 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 GPR171O14626 319 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 CBR1P16152 277 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 FAAP20Q6NZ36 180 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 PAPD4Q6PIY7 484 aaKnown RBP14.69□□□□□ -0.06
COL17A1-202ENST00000369733 ARRDC3Q96B67 414 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 CDCP1Q9H5V8 836 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 KCNIP1Q9NZI2 227 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 CCDC163A0A0D9SF12 145 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 YY2O15391 372 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 SOD1P00441 154 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms