RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 HOXB1P14653 301 aaPredicted RBP17.94■□□□□ 0.46
SMNDC1-201ENST00000369592 RBM34P42696 430 aaKnown RBP17.94■□□□□ 0.46
SMNDC1-201ENST00000369592 OR1E2P47887 323 aa17.94■□□□□ 0.46
SMNDC1-201ENST00000369592 SH3BGRP55822 239 aaPredicted RBP17.94■□□□□ 0.46
SMNDC1-201ENST00000369592 PRPS1P60891 318 aa17.94■□□□□ 0.46
SMNDC1-201ENST00000369592 SPOCK1Q08629 439 aa17.94■□□□□ 0.46
SMNDC1-201ENST00000369592 PIN1Q13526 163 aaPredicted RBP17.94■□□□□ 0.46
SMNDC1-201ENST00000369592 KLHL17Q6TDP4 642 aa17.94■□□□□ 0.46
SMNDC1-201ENST00000369592 LRRC17Q8N6Y2 441 aa17.94■□□□□ 0.46
SMNDC1-201ENST00000369592 TMEM171Q8WVE6 324 aa17.94■□□□□ 0.46
SMNDC1-201ENST00000369592 LIPHQ8WWY8 451 aa17.94■□□□□ 0.46
SMNDC1-201ENST00000369592 CMTM5Q96DZ9 223 aa17.94■□□□□ 0.46
SMNDC1-201ENST00000369592 CISD1Q9NZ45 108 aaKnown RBP17.94■□□□□ 0.46
SMNDC1-201ENST00000369592 ZNF229Q9UJW7 825 aa17.94■□□□□ 0.46
SMNDC1-201ENST00000369592 A4GNTQ9UNA3 340 aa17.94■□□□□ 0.46
SMNDC1-201ENST00000369592 ARFGEF3Q5TH69 2177 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 ZANQ9Y493 2812 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 E7EQL1 145 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 ARHGEF9O43307 516 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 SHOX2O60902 331 aaPredicted RBP17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 NQO1P15559 274 aaKnown RBP17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 FUT4P22083 530 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 UGT2B15P54855 530 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 POU3F1Q03052 451 aaPredicted RBP17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 LRRC23Q53EV4 343 aaPredicted RBP17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 Q5PR19 223 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 ANKRD16Q6P6B7 361 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 B3GLCTQ6Y288 498 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 CBLL1Q75N03 491 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 ZNF627Q7L945 461 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 FAM169BQ8N8A8 192 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 PIK3C3Q8NEB9 887 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 TRAF4Q9BUZ4 470 aaPredicted RBP17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 EMC6Q9BV81 110 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 C1QTNF6Q9BXI9 259 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 MED29Q9NX70 200 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 LAMP3Q9UQV4 416 aa17.93■□□□□ 0.46
SMNDC1-201ENST00000369592 SLC35F4A4IF30 521 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 CXCR6O00574 342 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 AKAP8O43823 692 aaKnown RBP17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 KRT33AO76009 404 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 WNT11O96014 354 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 IGLV1-44P01699 117 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 MT-ND1P03886 318 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 CDH2P19022 906 aaPredicted RBP17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 PAX7P23759 505 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 NUDT2P50583 147 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 CDH11P55287 796 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 PSME3P61289 254 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 RPS4XP62701 263 aaKnown RBP17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 ARF1P84077 181 aaKnown RBP17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 C3orf36Q3SXR2 165 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 HMBOX1Q6NT76 420 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 DEF8Q6ZN54 512 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 TSEN54Q7Z6J9 526 aaKnown RBP17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 VTCN1Q7Z7D3 282 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 C10orf53Q8N6V4 93 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 TMEM255BQ8WV15 326 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 PERPQ96FX8 193 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 FAM107BQ9H098 131 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 NSRP1Q9H0G5 558 aaKnown RBP17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 ALG2Q9H553 416 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 CXorf56Q9H5V9 222 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 CRLF2Q9HC73 371 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 NANSQ9NR45 359 aa17.92■□□□□ 0.46
SMNDC1-201ENST00000369592 M0R1B8 84 aa17.91■□□□□ 0.46
SMNDC1-201ENST00000369592 NDUFAB1O14561 156 aa17.91■□□□□ 0.46
SMNDC1-201ENST00000369592 ADORA3P0DMS8 318 aa17.91■□□□□ 0.46
SMNDC1-201ENST00000369592 TAS2R41P59536 307 aa17.91■□□□□ 0.46
SMNDC1-201ENST00000369592 GNGT1P63211 74 aa17.91■□□□□ 0.46
SMNDC1-201ENST00000369592 FXNQ16595 210 aa17.91■□□□□ 0.46
SMNDC1-201ENST00000369592 CEACAM16Q2WEN9 425 aa17.91■□□□□ 0.46
SMNDC1-201ENST00000369592 C11orf71Q6IPW1 123 aa17.91■□□□□ 0.46
SMNDC1-201ENST00000369592 CPLX4Q7Z7G2 160 aa17.91■□□□□ 0.46
SMNDC1-201ENST00000369592 GPR137CQ8N3F9 429 aa17.91■□□□□ 0.46
SMNDC1-201ENST00000369592 MAN2C1Q9NTJ4 1040 aa17.91■□□□□ 0.46
SMNDC1-201ENST00000369592 C20orf141Q9NUB4 165 aa17.91■□□□□ 0.46
SMNDC1-201ENST00000369592 SNX13Q9Y5W8 968 aa17.91■□□□□ 0.46
SMNDC1-201ENST00000369592 TLN2Q9Y4G6 2542 aa17.91■□□□□ 0.46
SMNDC1-201ENST00000369592 IGHV1-18A0A0C4DH31 117 aa17.9■□□□□ 0.46
SMNDC1-201ENST00000369592 ZNF503-AS2A6NEH8 195 aa17.9■□□□□ 0.46
SMNDC1-201ENST00000369592 ZNF99A8MXY4 864 aaPredicted RBP17.9■□□□□ 0.46
SMNDC1-201ENST00000369592 KPNA4O00629 521 aaPredicted RBP17.9■□□□□ 0.46
SMNDC1-201ENST00000369592 FFAR1O14842 300 aa17.9■□□□□ 0.46
SMNDC1-201ENST00000369592 PRSS23O95084 383 aa17.9■□□□□ 0.46
SMNDC1-201ENST00000369592 YTHDF3Q7Z739 585 aaKnown RBP17.9■□□□□ 0.46
SMNDC1-201ENST00000369592 OR6X1Q8NH79 312 aa17.9■□□□□ 0.46
SMNDC1-201ENST00000369592 PFN4Q8NHR9 129 aa17.9■□□□□ 0.46
SMNDC1-201ENST00000369592 TMEM239Q8WW34 195 aa17.9■□□□□ 0.46
SMNDC1-201ENST00000369592 TMEM54Q969K7 222 aa17.9■□□□□ 0.46
SMNDC1-201ENST00000369592 TPD52L3Q96J77 140 aa17.9■□□□□ 0.46
SMNDC1-201ENST00000369592 PRRC1Q96M27 445 aa17.9■□□□□ 0.46
SMNDC1-201ENST00000369592 HS6ST2Q96MM7 605 aa17.9■□□□□ 0.46
SMNDC1-201ENST00000369592 DHRS9Q9BPW9 319 aa17.9■□□□□ 0.46
SMNDC1-201ENST00000369592 CSPG4Q6UVK1 2322 aa17.9■□□□□ 0.46
SMNDC1-201ENST00000369592 A0A096LPE4 126 aa17.89■□□□□ 0.45
SMNDC1-201ENST00000369592 A0A1W2PPZ6 126 aa17.89■□□□□ 0.45
SMNDC1-201ENST00000369592 OR7A10O76100 309 aa17.89■□□□□ 0.45
SMNDC1-201ENST00000369592 IGKV3-15P01624 115 aa17.89■□□□□ 0.45
SMNDC1-201ENST00000369592 IFNGR1P15260 489 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms