RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 PIN1Q13526 163 aaPredicted RBP16.55■□□□□ 0.24
CKS1B-203ENST00000368439 HMBOX1Q6NT76 420 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 ANKRD16Q6P6B7 361 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 DEF8Q6ZN54 512 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 SLC46A3Q7Z3Q1 461 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 YTHDF3Q7Z739 585 aaKnown RBP16.55■□□□□ 0.24
CKS1B-203ENST00000368439 DTX2Q86UW9 622 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 C20orf196Q8IYI0 205 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 PIK3C3Q8NEB9 887 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 TRAF4Q9BUZ4 470 aaPredicted RBP16.55■□□□□ 0.24
CKS1B-203ENST00000368439 EMC6Q9BV81 110 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 FAM107BQ9H098 131 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 CXorf56Q9H5V9 222 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 RIMS3Q9UJD0 308 aa16.55■□□□□ 0.24
CKS1B-203ENST00000368439 SETD2Q9BYW2 2564 aaPredicted RBP16.54■□□□□ 0.24
CKS1B-203ENST00000368439 SLC35F4A4IF30 521 aa16.54■□□□□ 0.24
CKS1B-203ENST00000368439 KPNA4O00629 521 aaPredicted RBP16.54■□□□□ 0.24
CKS1B-203ENST00000368439 AKAP8O43823 692 aaKnown RBP16.54■□□□□ 0.24
CKS1B-203ENST00000368439 WNT11O96014 354 aa16.54■□□□□ 0.24
CKS1B-203ENST00000368439 NUDT2P50583 147 aa16.54■□□□□ 0.24
CKS1B-203ENST00000368439 UGT2B15P54855 530 aa16.54■□□□□ 0.24
CKS1B-203ENST00000368439 SH3BGRP55822 239 aaPredicted RBP16.54■□□□□ 0.24
CKS1B-203ENST00000368439 ARF1P84077 181 aaKnown RBP16.54■□□□□ 0.24
CKS1B-203ENST00000368439 TMEM255BQ8WV15 326 aa16.54■□□□□ 0.24
CKS1B-203ENST00000368439 LRR1Q96L50 414 aa16.54■□□□□ 0.24
CKS1B-203ENST00000368439 GRIP2Q9C0E4 1043 aa16.54■□□□□ 0.24
CKS1B-203ENST00000368439 CRLF2Q9HC73 371 aa16.54■□□□□ 0.24
CKS1B-203ENST00000368439 CRNNQ9UBG3 495 aaPredicted RBP16.54■□□□□ 0.24
CKS1B-203ENST00000368439 ABCD2Q9UBJ2 740 aa16.54■□□□□ 0.24
CKS1B-203ENST00000368439 ZNF229Q9UJW7 825 aa16.54■□□□□ 0.24
CKS1B-203ENST00000368439 A0A096LPE4 126 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 A0A1W2PPZ6 126 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 IGF2P01344 180 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 MT-ND1P03886 318 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 ADORA3P0DMS8 318 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 HOXB1P14653 301 aaPredicted RBP16.53■□□□□ 0.24
CKS1B-203ENST00000368439 FUT4P22083 530 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 AHCYP23526 432 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 PRDX6P30041 224 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 RBM34P42696 430 aaKnown RBP16.53■□□□□ 0.24
CKS1B-203ENST00000368439 GSK3BP49841 420 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 TAS2R41P59536 307 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 CEACAM16Q2WEN9 425 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 SLC22A25Q6T423 547 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 KLHL24Q6TFL4 600 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 VTCN1Q7Z7D3 282 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 GPR137CQ8N3F9 429 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 PFN4Q8NHR9 129 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 CMTM5Q96DZ9 223 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 TPD52L3Q96J77 140 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 Q96MF0 132 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 ALG2Q9H553 416 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 NANSQ9NR45 359 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 C20orf141Q9NUB4 165 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 A4GNTQ9UNA3 340 aa16.53■□□□□ 0.24
CKS1B-203ENST00000368439 IGHV1-18A0A0C4DH31 117 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 ZNF503-AS2A6NEH8 195 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 C11orf98E9PRG8 122 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 M0R3G1 203 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 CXCR6O00574 342 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 THRBP10828 461 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 CDKN1AP38936 164 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 GNGT1P63211 74 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 TUBA1BP68363 451 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 TUBA4AP68366 448 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 CARD17Q5XLA6 110 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 C11orf71Q6IPW1 123 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 TUBA1AQ71U36 451 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 CBLL1Q75N03 491 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 PIGWQ7Z7B1 504 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 CPLX4Q7Z7G2 160 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 CIARTQ8N365 385 aaPredicted RBP16.52■□□□□ 0.24
CKS1B-203ENST00000368439 C18orf12Q96KH6 178 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 DHRS9Q9BPW9 319 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 NSRP1Q9H0G5 558 aaKnown RBP16.52■□□□□ 0.24
CKS1B-203ENST00000368439 GSX1Q9H4S2 264 aaPredicted RBP16.52■□□□□ 0.24
CKS1B-203ENST00000368439 SNX13Q9Y5W8 968 aa16.52■□□□□ 0.24
CKS1B-203ENST00000368439 C2CD3Q4AC94 2353 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 ZNF99A8MXY4 864 aaPredicted RBP16.51■□□□□ 0.23
CKS1B-203ENST00000368439 IGLV1-44P01699 117 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 TSPAN19P0C672 248 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 IFNGR1P15260 489 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 PAX7P23759 505 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 TTKP33981 857 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 ATP5J2P56134 94 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 PSME3P61289 254 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 CAMK2DQ13557 499 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 C3orf36Q3SXR2 165 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 SLC35D2Q76EJ3 337 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 ZNF627Q7L945 461 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 FAM169BQ8N8A8 192 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 TMEM239Q8WW34 195 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 LIPHQ8WWY8 451 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 PRRC1Q96M27 445 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 SLC38A2Q96QD8 506 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 MAN2C1Q9NTJ4 1040 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 NF1P21359 2839 aa16.51■□□□□ 0.23
CKS1B-203ENST00000368439 ATP6V1G2-DDX39BF2Z307 99 aa16.5■□□□□ 0.23
CKS1B-203ENST00000368439 FFAR1O14842 300 aa16.5■□□□□ 0.23
CKS1B-203ENST00000368439 SERPINI2O75830 405 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms