RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 TREM1Q9NP99 234 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 SLC22A11Q9NSA0 550 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 THAP10Q9P2Z0 257 aaPredicted RBP17.99■□□□□ 0.47
TRIM58-201ENST00000366481 VPS13AQ96RL7 3174 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 FAM171A2A8MVW0 826 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 J3QRE1 110 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 PPP2CBP62714 309 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 RPS15P62841 145 aaKnown RBP17.99■□□□□ 0.47
TRIM58-201ENST00000366481 PPP2CAP67775 309 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 DHODHQ02127 395 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 ELFN2Q5R3F8 820 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 RANBP3LQ86VV4 465 aaPredicted RBP17.99■□□□□ 0.47
TRIM58-201ENST00000366481 PTCHD1Q96NR3 888 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 SLC25A32Q9H2D1 315 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 INPP5EQ9NRR6 644 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 V9GY05 133 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 IDSB3KWA1 339 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 SYT5O00445 386 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 CTSVO60911 334 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 LIPCP11150 499 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 RUNX3Q13761 415 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 RUNX2Q13950 521 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 RBMS2Q15434 407 aaKnown RBP17.98■□□□□ 0.47
TRIM58-201ENST00000366481 GUCA2BQ16661 112 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 MRPL2Q5T653 305 aaKnown RBP17.98■□□□□ 0.47
TRIM58-201ENST00000366481 NRROSQ86YC3 692 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 SVBPQ8N300 66 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 OR51S1Q8NGJ8 323 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 BPIFA2Q96DR5 249 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 CPNE2Q96FN4 548 aaPredicted RBP17.98■□□□□ 0.47
TRIM58-201ENST00000366481 SLC17A9Q9BYT1 436 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 SLITRK2Q9H156 845 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 CALML5Q9NZT1 146 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 ANKRD20A5PA0PJZ0 165 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 OR6C65A6NJZ3 312 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 MAS1P04201 325 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 CSN2P05814 226 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 TMIGD3P0DMS9 266 aaPredicted RBP17.98■□□□□ 0.47
TRIM58-201ENST00000366481 CNR1P21554 472 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 CMPK1P30085 196 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 CDK5R1Q15078 307 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 KRT77Q7Z794 578 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 PUSL1Q8N0Z8 303 aaKnown RBP17.98■□□□□ 0.47
TRIM58-201ENST00000366481 SMIM19Q96E16 107 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 DNAJA3Q96EY1 480 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 LCORQ96JN0 433 aaPredicted RBP17.98■□□□□ 0.47
TRIM58-201ENST00000366481 C10orf90Q96M02 699 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 KCNE5Q9UJ90 142 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 SLC35A3Q9Y2D2 325 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 F5H0A9 414 aaPredicted RBP17.98■□□□□ 0.47
TRIM58-201ENST00000366481 CTDSPLO15194 276 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 CD53P19397 219 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 ZNF542PQ5EBM4 170 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 FAM199XQ6PEV8 388 aaPredicted RBP17.98■□□□□ 0.47
TRIM58-201ENST00000366481 TMEM64Q6YI46 380 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 SLC16A13Q7RTY0 426 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 LRRC25Q8N386 305 aaPredicted RBP17.98■□□□□ 0.47
TRIM58-201ENST00000366481 OR4D10Q8NGI6 311 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 STK35Q8TDR2 534 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 NR4A3Q92570 626 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 KISS1RQ969F8 398 aaPredicted RBP17.98■□□□□ 0.47
TRIM58-201ENST00000366481 SLC25A38Q96DW6 304 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 CRISPLD2Q9H0B8 497 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 FBXL3Q9UKT7 428 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 MOKQ9UQ07 419 aa17.98■□□□□ 0.47
TRIM58-201ENST00000366481 SEC16AO15027 2179 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 LOC100509620A0A075B734 347 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 ACTR1BP42025 376 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 ACTR1AP61163 376 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 ACTC1P68032 377 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 ACTA1P68133 377 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 GPM6BQ13491 265 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 TMEM52Q8NDY8 209 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 PBX4Q9BYU1 374 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 CHST6Q9GZX3 395 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 TMEM231Q9H6L2 316 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 CMC2Q9NRP2 79 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 ZNF230Q9UIE0 474 aaPredicted RBP17.97■□□□□ 0.47
TRIM58-201ENST00000366481 OR2AT4A6NND4 320 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 LINC00587B1AMM8 73 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 IMPA2O14732 288 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 MST1P26927 711 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 RPL4P36578 427 aaKnown RBP17.97■□□□□ 0.47
TRIM58-201ENST00000366481 TAS2R20P59543 309 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 TRA2BP62995 288 aaKnown RBP17.97■□□□□ 0.47
TRIM58-201ENST00000366481 MANEAQ5SRI9 462 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 OR4C16Q8NGL9 310 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 SRMSQ9H3Y6 488 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 CTSFQ9UBX1 484 aa17.97■□□□□ 0.47
TRIM58-201ENST00000366481 GXYLT2A0PJZ3 443 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 TO15178 435 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 PRICKLE3O43900 615 aaPredicted RBP17.96■□□□□ 0.47
TRIM58-201ENST00000366481 IFNGP01579 166 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 IL5P05113 134 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 GDI1P31150 447 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 LIN54Q6MZP7 749 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 UNQ6126/PRO20091Q6UXV3 157 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 NDUFAF7Q7L592 441 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 OVCH1Q7RTY7 1134 aa17.96■□□□□ 0.47
TRIM58-201ENST00000366481 RAB7BQ96AH8 199 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms