RNA–Protein interactions for RNA: ENST00000363347.1

RNU6-839P-201, Transcript of RNA, U6 small nuclear 839, pseudogene, humanhuman

BASIC

Gene RNU6-839P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-839P-201ENST00000363347 NUP50Q9UKX7 468 aa3.01□□□□□ -1.93
RNU6-839P-201ENST00000363347 CDHR2Q9BYE9 1310 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 A0A075B6Q4 140 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 USP27XA6NNY8 438 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 CCL21O00585 134 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 PPP1R2P9O14990 202 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 LSM1O15116 133 aaKnown RBP3□□□□□ -1.93
RNU6-839P-201ENST00000363347 DFNA5O60443 496 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 NPIPB7O75200 414 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 AGTP01019 485 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 HPNP05981 417 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 GIPP09681 153 aaPredicted RBP3□□□□□ -1.93
RNU6-839P-201ENST00000363347 ICAM2P13598 275 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 TCN1P20061 433 aaPredicted RBP3□□□□□ -1.93
RNU6-839P-201ENST00000363347 HTR1EP28566 365 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 PRRX1P54821 245 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 CDH6P55285 790 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 LYZP61626 148 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 VPS26BQ4G0F5 336 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 RAET1LQ5VY80 246 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 OTPQ5XKR4 325 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 LRRC66Q68CR7 880 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 CTRB2Q6GPI1 263 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 MFSD6LQ8IWD5 586 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 C11orf53Q8IXP5 236 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 TMEM61Q8N0U2 210 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 PUSL1Q8N0Z8 303 aaKnown RBP3□□□□□ -1.93
RNU6-839P-201ENST00000363347 ZNF557Q8N988 423 aaPredicted RBP3□□□□□ -1.93
RNU6-839P-201ENST00000363347 C20orf203Q8NBC4 194 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 SLC22A8Q8TCC7 542 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 FGF14Q92915 247 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 FCRL1Q96LA6 429 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 RANBP3Q9H6Z4 567 aaPredicted RBP3□□□□□ -1.93
RNU6-839P-201ENST00000363347 ANKRA2Q9H9E1 313 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 CALYQ9NYX4 217 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 NEUROG3Q9Y4Z2 214 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 SLC25A15Q9Y619 301 aa3□□□□□ -1.93
RNU6-839P-201ENST00000363347 FANCIQ9NVI1 1328 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 SMCO3A2RU48 225 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 C12orf71A8MTZ7 269 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 TCP11X1B4DZS4 312 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 TNFSF13O75888 250 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 IGHV2-5P01817 119 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 KRT14P02533 472 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 CHTF8P0CG12 524 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 ZNF43P17038 809 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 PRDX3P30048 256 aaKnown RBP2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 BTCP35070 178 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 RORAP35398 523 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 FBXW4P57775 412 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 GNB2P62879 340 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 GBE1Q04446 702 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 GPNMBQ14956 572 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 IL17AQ16552 155 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 CASC10Q5T4H9 136 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 LCE3CQ5T5A8 94 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 SLC8B1Q6J4K2 584 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 CNIH2Q6PI25 160 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 MS4A15Q8N5U1 240 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 ELMO1Q92556 727 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 KIFAP3Q92845 792 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 TSNARE1Q96NA8 513 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 RASL11BQ9BPW5 248 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 ANP32EQ9BTT0 268 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 RIOK2Q9BVS4 552 aaKnown RBP2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 NEK6Q9HC98 313 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 CCL28Q9NRJ3 127 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 CLCF1Q9UBD9 225 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 RABL2AQ9UBK7 228 aaPredicted RBP2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 THSD7BQ9C0I4 1608 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 AGRNO00468 2067 aa2.99□□□□□ -1.93
RNU6-839P-201ENST00000363347 C9JVG2 144 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 DNALI1O14645 258 aaPredicted RBP2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 MGRN1O60291 552 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 KLHL41O60662 606 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 ALDOBP05062 364 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 NPBWR2P48146 333 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 SUB1P53999 127 aaKnown RBP eCLIP2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 SH3BGRP55822 239 aaPredicted RBP2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 NUP107P57740 925 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 MRPS22P82650 360 aaKnown RBP2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 KIAA0087Q14695 138 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 ALKBH6Q3KRA9 238 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 SASS6Q6UVJ0 657 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 C6orf89Q6UWU4 347 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 ZNF836Q6ZNA1 936 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 THOC6Q86W42 341 aaKnown RBP2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 GTPBP8Q8N3Z3 284 aaPredicted RBP2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 DCAF4L2Q8NA75 395 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 OR52K2Q8NGK3 314 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 GPR151Q8TDV0 419 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 NDRG1Q92597 394 aaKnown RBP2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 MED8Q96G25 268 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 ZIM3Q96PE6 472 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 PANX1Q96RD7 426 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 SH3GL1Q99961 368 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 RARRES2Q99969 163 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 KCTD14Q9BQ13 255 aaPredicted RBP2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 DEFB127Q9H1M4 99 aa2.98□□□□□ -1.93
RNU6-839P-201ENST00000363347 ZNF160Q9HCG1 818 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms