RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 CACNG3O60359 315 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 ERLIN2O94905 339 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 HPNP05981 417 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 KRTAP1-4P0C5Y4 121 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 RBMY1DP0C7P1 496 aaKnown RBP2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 CHTF8P0CG12 524 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 RBMY1A1P0DJD3 496 aaKnown RBP2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 TCN1P20061 433 aaPredicted RBP2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 GALP22466 123 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 CD1BP29016 333 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 FMO3P31513 532 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 OTX1P32242 354 aaPredicted RBP2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 TNNT2P45379 298 aaPredicted RBP2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 ACLYP53396 1101 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 NUP107P57740 925 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 GPX6P59796 221 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 TIMM10P62072 90 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 MRPS22P82650 360 aaKnown RBP2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 NDPQ00604 133 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 PDIA2Q13087 525 aaKnown RBP2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 ARHGAP19Q14CB8 494 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 HERPUD1Q15011 391 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 CYTH1Q15438 398 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 NRF1Q16656 503 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 SPANXN2Q5MJ10 180 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 CTRB2Q6GPI1 263 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 SASS6Q6UVJ0 657 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 Q6ZSR3 168 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 ZNF557Q8N988 423 aaPredicted RBP2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 ACMSDQ8TDX5 336 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 PIBF1Q8WXW3 757 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 ARPC1AQ92747 370 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 SLC38A4Q969I6 547 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 RPUSD4Q96CM3 377 aaKnown RBP2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 SLC35E1Q96K37 410 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 IMMP1LQ96LU5 166 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 ZNF578Q96N58 590 aaPredicted RBP2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 TGS1Q96RS0 853 aaKnown RBP2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 OR11A1Q9GZK7 315 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 DEFB127Q9H1M4 99 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 MRPL47Q9HD33 250 aaKnown RBP2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 XCL2Q9UBD3 114 aa2.61□□□□□ -1.99
RNU6-28P-201ENST00000362378 KIR2DL5BA0A0G2JN68 375 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 KIR2DL5BA0A0G2JPC4 375 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 USP27XA6NNY8 438 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 C12orf71A8MTZ7 269 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 ERVV-1B6SEH8 477 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 GOSR2O14653 212 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 FAM189A1O60320 539 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 KLHL41O60662 606 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 FTH1P02794 183 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 ICAM2P13598 275 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 FUT3P21217 361 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 SLC2A5P22732 501 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 HTR1EP28566 365 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 ATP5C1P36542 298 aaKnown RBP2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 ATP5OP48047 213 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 UGT2B15P54855 530 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 PRPS1P60891 318 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 LYZP61626 148 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 GNB2P62879 340 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 IRX3P78415 501 aaPredicted RBP2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 ACVR1Q04771 509 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 VAX1Q5SQQ9 334 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 SLC8B1Q6J4K2 584 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 C19orf35Q6ZS72 473 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 RNF165Q6ZSG1 346 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 BZW1Q7L1Q6 419 aaKnown RBP2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 NIPA1Q7RTP0 329 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 LHFPL3Q86UP9 236 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 RALGPS2Q86X27 583 aaPredicted RBP2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 PRR22Q8IZ63 422 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 SPAG16Q8N0X2 631 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 KIR2DL5AQ8N109 375 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 MS4A15Q8N5U1 240 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 C20orf203Q8NBC4 194 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 OR2L5Q8NG80 312 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 OR2G2Q8NGZ5 317 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 KIR2DL5BQ8NHK3 375 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 TSEN15Q8WW01 171 aaKnown RBP2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 DCUN1D4Q92564 292 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 MCUR1Q96AQ8 359 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 PHYHIPLQ96FC7 376 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 ROGDIQ9GZN7 287 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 SRMSQ9H3Y6 488 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 EXO5Q9H790 373 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 TMEM185BQ9H7F4 350 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 ANKRA2Q9H9E1 313 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 SIAEQ9HAT2 523 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 MTRF1LQ9UGC7 380 aaKnown RBP2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 CAB39Q9Y376 341 aaPredicted RBP2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 SLC25A15Q9Y619 301 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 CHD4Q14839 1912 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 USP47Q96K76 1375 aa2.6□□□□□ -1.99
RNU6-28P-201ENST00000362378 A0A0G2JN53 185 aa2.59□□□□□ -1.99
RNU6-28P-201ENST00000362378 SMCO3A2RU48 225 aa2.59□□□□□ -1.99
RNU6-28P-201ENST00000362378 DLGAP1O14490 977 aa2.59□□□□□ -1.99
RNU6-28P-201ENST00000362378 DYNC1I1O14576 645 aa2.59□□□□□ -1.99
RNU6-28P-201ENST00000362378 SLC31A2O15432 143 aa2.59□□□□□ -1.99
RNU6-28P-201ENST00000362378 CLOCKO15516 846 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms