RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 TSSK2Q96PF2 358 aa15.02■□□□□ -0
SCAF1-201ENST00000360565 ST6GALNAC5Q9BVH7 336 aa15.02■□□□□ -0
SCAF1-201ENST00000360565 SLC5A7Q9GZV3 580 aa15.02■□□□□ -0
SCAF1-201ENST00000360565 APMAPQ9HDC9 416 aa15.02■□□□□ -0
SCAF1-201ENST00000360565 SLC52A3Q9NQ40 469 aa15.02■□□□□ -0
SCAF1-201ENST00000360565 HIF3AQ9Y2N7 669 aa15.02■□□□□ -0
SCAF1-201ENST00000360565 HRO43593 1189 aa15.02□□□□□ -0.01
SCAF1-201ENST00000360565 CLUP10909 449 aa15.02□□□□□ -0.01
SCAF1-201ENST00000360565 HTR2AP28223 471 aa15.02□□□□□ -0.01
SCAF1-201ENST00000360565 GPR155Q7Z3F1 870 aa15.02□□□□□ -0.01
SCAF1-201ENST00000360565 PXKQ7Z7A4 578 aa15.02□□□□□ -0.01
SCAF1-201ENST00000360565 SFTPA1Q8IWL2 248 aa15.02□□□□□ -0.01
SCAF1-201ENST00000360565 OR13C9Q8NGT0 318 aa15.02□□□□□ -0.01
SCAF1-201ENST00000360565 OR14L1PQ8NHC6 308 aa15.02□□□□□ -0.01
SCAF1-201ENST00000360565 ZFPM2Q8WW38 1151 aa15.02□□□□□ -0.01
SCAF1-201ENST00000360565 PHYHIPQ92561 330 aa15.02□□□□□ -0.01
SCAF1-201ENST00000360565 ZMAT3Q9HA38 289 aaKnown RBP15.02□□□□□ -0.01
SCAF1-201ENST00000360565 GPATCH2Q9NW75 528 aa15.02□□□□□ -0.01
SCAF1-201ENST00000360565 AHCTF1Q8WYP5 2266 aa15.02□□□□□ -0.01
SCAF1-201ENST00000360565 MTRF1O75570 445 aaKnown RBP15.02□□□□□ -0.01
SCAF1-201ENST00000360565 LCATP04180 440 aa15.02□□□□□ -0.01
SCAF1-201ENST00000360565 RPS27P42677 84 aaKnown RBP15.02□□□□□ -0.01
SCAF1-201ENST00000360565 CXCL12P48061 93 aa15.02□□□□□ -0.01
SCAF1-201ENST00000360565 PCBP4P57723 403 aaKnown RBP15.02□□□□□ -0.01
SCAF1-201ENST00000360565 RBMS2Q15434 407 aaKnown RBP15.02□□□□□ -0.01
SCAF1-201ENST00000360565 SSX1Q16384 188 aa15.02□□□□□ -0.01
SCAF1-201ENST00000360565 HAGHLQ6PII5 290 aaPredicted RBP15.02□□□□□ -0.01
SCAF1-201ENST00000360565 ZFAND5O76080 213 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 RSU1Q15404 277 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 GTPBP8Q8N3Z3 284 aaPredicted RBP15.01□□□□□ -0.01
SCAF1-201ENST00000360565 TOMM40LQ969M1 308 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 GPR55Q9Y2T6 319 aaPredicted RBP15.01□□□□□ -0.01
SCAF1-201ENST00000360565 RHBDD3Q9Y3P4 386 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 POM121CA8CG34 1229 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 ZNF705EA8MWA4 302 aaPredicted RBP15.01□□□□□ -0.01
SCAF1-201ENST00000360565 BRINP1O60477 761 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 HTR3BO95264 441 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 TRAPPC2P0DI81 140 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 TRAPPC2BP0DI82 140 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 PTBP1P26599 531 aaKnown RBP eCLIP15.01□□□□□ -0.01
SCAF1-201ENST00000360565 POLR2HP52434 150 aaKnown RBP15.01□□□□□ -0.01
SCAF1-201ENST00000360565 DGCR2P98153 550 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 MLC1Q15049 377 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 LINC00346Q8IVM7 164 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 FAM160A2Q8N612 972 aaPredicted RBP15.01□□□□□ -0.01
SCAF1-201ENST00000360565 C16orf52Q8NHV5 167 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 CDC6Q99741 560 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 IL20Q9NYY1 176 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 PTTG3PQ9NZH4 202 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 CCDC88CQ9P219 2028 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 C2orf72A6NCS6 295 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 TBX19O60806 448 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 CRYZL1O95825 349 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 ZNF16P17020 682 aaPredicted RBP15.01□□□□□ -0.01
SCAF1-201ENST00000360565 GNRHRP30968 328 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 ZFP36L2P47974 494 aaKnown RBP15.01□□□□□ -0.01
SCAF1-201ENST00000360565 IL17RDQ8NFM7 739 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 OR4Q3Q8NH05 313 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 ZBTB8AQ96BR9 441 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 PRRT1Q99946 306 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 EMC9Q9Y3B6 208 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 PIKFYVEQ9Y2I7 2098 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 A0A0B4J203 849 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 LAMTOR5O43504 91 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 SPI1P17947 270 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 CCR9P51686 369 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 GPLD1P80108 840 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 CD300CQ08708 224 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 SLC35D3Q5M8T2 416 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 CA13Q8N1Q1 262 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 SLC43A2Q8N370 569 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 ZNF707Q96C28 371 aaPredicted RBP15.01□□□□□ -0.01
SCAF1-201ENST00000360565 CTRCQ99895 268 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 MAN2C1Q9NTJ4 1040 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 MMP17Q9ULZ9 603 aa15.01□□□□□ -0.01
SCAF1-201ENST00000360565 PTRH2Q9Y3E5 179 aaKnown RBP15.01□□□□□ -0.01
SCAF1-201ENST00000360565 MIA3Q5JRA6 1907 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 A0A087WV62 115 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 BCAT2O15382 392 aaPredicted RBP15□□□□□ -0.01
SCAF1-201ENST00000360565 SYNGR4O95473 234 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 DIO1P49895 249 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 C21orf58P58505 322 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 RIPPLY1Q0D2K3 151 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 KCNAB1Q14722 419 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 RPP25Q9BUL9 199 aaKnown RBP15□□□□□ -0.01
SCAF1-201ENST00000360565 HLA-AP01891 365 aaKnown RBP15□□□□□ -0.01
SCAF1-201ENST00000360565 TP53P04637 393 aaPredicted RBP15□□□□□ -0.01
SCAF1-201ENST00000360565 SERPINA5P05154 406 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 HTR2CP28335 458 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 DRD3P35462 400 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 ETV6P41212 452 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 TMEM176BQ3YBM2 270 aaPredicted RBP15□□□□□ -0.01
SCAF1-201ENST00000360565 PLPP7Q8NBV4 271 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 DHRS1Q96LJ7 313 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 SEC22CQ9BRL7 303 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 SIRT3Q9NTG7 399 aaPredicted RBP15□□□□□ -0.01
SCAF1-201ENST00000360565 MMACHCQ9Y4U1 282 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 DNAJB6O75190 326 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 IGHG1P01857 330 aa15□□□□□ -0.01
SCAF1-201ENST00000360565 DLSTP36957 453 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms