RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PLK5Q496M5 336 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 DCLRE1CQ96SD1 692 aaKnown RBP14.87□□□□□ -0.03
COL18A1-203ENST00000359759 KIAA0141Q14154 515 aaPredicted RBP14.87□□□□□ -0.03
COL18A1-203ENST00000359759 CREB3L2Q70SY1 520 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 CMTM2Q8TAZ6 248 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 TAF9BQ9HBM6 251 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 SULT1C4O75897 302 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 GSTP1P09211 210 aaKnown RBP14.87□□□□□ -0.03
COL18A1-203ENST00000359759 EDDM3BP56851 147 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 ERVFC1P60507 584 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 HTRA4P83105 476 aaPredicted RBP14.87□□□□□ -0.03
COL18A1-203ENST00000359759 HES1Q14469 280 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 TMEM255BQ8WV15 326 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 NIT2Q9NQR4 276 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 CAMTA1Q9Y6Y1 1673 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 TGFBR3Q03167 851 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 SFT2D1Q8WV19 159 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 OR5M11Q96RB7 305 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 LMAN1LQ9HAT1 526 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 ANGPTL7O43827 346 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 SELENOFO60613 162 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 ZNF623O75123 536 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 SCG5P05408 212 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 GNB1P62873 340 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 SIRPAP78324 504 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 KCNJ10P78508 379 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 EDDM3AQ14507 147 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 KIR2DS3Q14952 304 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 NHSL2Q5HYW2 709 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 NANPQ8TBE9 248 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 RTP4Q96DX8 246 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 IL17CQ9P0M4 197 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 PPP1R2P9O14990 202 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 NFYBP25208 207 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 SUOXP51687 545 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 PARS2Q7L3T8 475 aaKnown RBP14.86□□□□□ -0.03
COL18A1-203ENST00000359759 SIAH1Q8IUQ4 282 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 NPAP1Q9NZP6 1156 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 NOSIPQ9Y314 301 aaKnown RBP14.86□□□□□ -0.03
COL18A1-203ENST00000359759 SNX11Q9Y5W9 270 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 SLC22A7Q9Y694 548 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 EIF3FO00303 357 aaPredicted RBP14.86□□□□□ -0.03
COL18A1-203ENST00000359759 HIST1H1TP22492 207 aaPredicted RBP14.86□□□□□ -0.03
COL18A1-203ENST00000359759 F2RP25116 425 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 TSPAN31Q12999 210 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 HBMQ6B0K9 141 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 DPPA4Q7L190 304 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 MDGA2Q7Z553 956 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 DPF1Q92782 380 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 BAZ2AQ9UIF9 1905 aaKnown RBP14.86□□□□□ -0.03
COL18A1-203ENST00000359759 TGM1P22735 817 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 S100A11P31949 105 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 BIDP55957 195 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 IAH1Q2TAA2 248 aaPredicted RBP14.86□□□□□ -0.03
COL18A1-203ENST00000359759 GRAMD2AQ8IUY3 354 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 MARC2Q969Z3 335 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 NSG1A0A0A6YYJ2 146 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 F6UZH7 168 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 INHBCP55103 352 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 RACK1P63244 317 aaKnown RBP14.86□□□□□ -0.03
COL18A1-203ENST00000359759 OR2T11Q8NH01 316 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 TMEM40Q8WWA1 233 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 NKX6-2Q9C056 277 aaPredicted RBP14.86□□□□□ -0.03
COL18A1-203ENST00000359759 ARNTLO00327 626 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 HS3ST1O14792 307 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 CALCBP10092 127 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 TPMTP51580 245 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 C9orf152Q5JTZ5 239 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 SSX7Q7RTT5 188 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 KCNRGQ8N5I3 272 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 OR10Z1Q8NGY1 313 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 ZNF480Q8WV37 535 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 TMEM106AQ96A25 262 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 TOE1Q96GM8 510 aaKnown RBP14.86□□□□□ -0.03
COL18A1-203ENST00000359759 KCNJ15Q99712 375 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 PRR14Q9BWN1 585 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 DECR2Q9NUI1 292 aa14.86□□□□□ -0.03
COL18A1-203ENST00000359759 PTGESO14684 152 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 OR2C1O95371 312 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 CPT2P23786 658 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 LRP10Q7Z4F1 713 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 SCD5Q86SK9 330 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 OR2G3Q8NGZ4 309 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 DTD2Q96FN9 168 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 TMEM231Q9H6L2 316 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 EXO1Q9UQ84 846 aaKnown RBP14.85□□□□□ -0.03
COL18A1-203ENST00000359759 ENTPD2Q9Y5L3 495 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 PRAMEF26H0Y7S4 382 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 NXPH2O95156 264 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 PDGFAP04085 211 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 SF3B4Q15427 424 aaKnown RBP eCLIP14.85□□□□□ -0.033e-7■■■■■ 27.8
COL18A1-203ENST00000359759 KCTD11Q693B1 232 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 HIST2H3AQ71DI3 136 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 NTF3P20783 257 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 ITGB7P26010 798 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 ADAM5Q6NVV9 412 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 SLC35G3Q8N808 338 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 HRASLS5Q96KN8 279 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 TMEM184BQ9Y519 407 aaPredicted RBP14.85□□□□□ -0.03
COL18A1-203ENST00000359759 CBY3A6NI87 242 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms