RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TTKP33981 857 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 SFTPDP35247 375 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 MTNR1AP48039 350 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 OR2B6P58173 313 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 FOXK1P85037 733 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 FOXO1Q12778 655 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 ZP4Q12836 540 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 TMED1Q13445 227 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 KRR1Q13601 381 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 IGFL2Q6UWQ7 119 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 CLEC18BQ6UXF7 455 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 H1FNTQ75WM6 255 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 FAM122BQ7Z309 247 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 SULF2Q8IWU5 870 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 CLEC18CQ8NCF0 446 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 ADPRHL1Q8NDY3 354 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 FAM83FQ8NEG4 500 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 SDR9C7Q8NEX9 313 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 RORBQ92753 470 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 RELTQ969Z4 430 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 RASD2Q96D21 266 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 RNFT2Q96EX2 444 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 TMEM80Q96HE8 168 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 Q96M85 177 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 SMAD5Q99717 465 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 HES7Q9BYE0 225 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 MRPS18AQ9NVS2 196 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 TAS2R5Q9NYW4 299 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 GRHPRQ9UBQ7 328 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 WARS2Q9UGM6 360 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 B3GALT5Q9Y2C3 310 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 PCDHGA9Q9Y5G4 932 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 FBN2P35556 2912 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 A0A1W2PNR3 127 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 A0A1W2PNV4 684 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 A0A1W2PRG6 482 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 LINC01387J3KSC0 135 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 SERPINI2O75830 405 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 TRAPPC6AO75865 159 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 PMS2P2O95744 297 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 PCMT1P22061 227 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 AHCYP23526 432 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 SHC1P29353 583 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 MEOX1P50221 254 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 GTF2A1P52655 376 aaPredicted RBP12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 RPS7P62081 194 aaKnown RBP12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 RAC1P63000 192 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 SLC35A1P78382 337 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 PLGLB1Q02325 96 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 EMX1Q04741 257 aaPredicted RBP12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 LGALS3BPQ08380 585 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 PUDPQ08623 228 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 RAB40BQ12829 278 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 TMEM176BQ3YBM2 270 aaPredicted RBP12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 ZNF362Q5T0B9 420 aaPredicted RBP12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 LCN1P1Q5VSP4 162 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 GTF2IRD2BQ6EKJ0 949 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 XAF1Q6GPH4 301 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 BORAQ6PGQ7 559 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 MEPCEQ7L2J0 689 aaKnown RBP12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 GALNTL5Q7Z4T8 443 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 YRDCQ86U90 279 aaKnown RBP12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 GTF2IRD2Q86UP8 949 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 BBS1Q8NFJ9 593 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 OR52I1Q8NGK6 324 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 FAR1Q8WVX9 515 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 MUL1Q969V5 352 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 LGALS12Q96DT0 336 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 SCMH1Q96GD3 660 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 SFXN2Q96NB2 322 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 CDCA4Q9BXL8 241 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 ZNF703Q9H7S9 590 aaPredicted RBP12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 MED20Q9H944 212 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 ACOT13Q9NPJ3 140 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 SEC14L4Q9UDX3 406 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 DIMT1Q9UNQ2 313 aaKnown RBP12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 TRAPPC4Q9Y296 219 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 PCDHGB7Q9Y5F8 929 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 COMMD3-BMI1R4GMX3 469 aa12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 TNRC6AQ8NDV7 1962 aaKnown RBP12.43□□□□□ -0.42
PDLIM5-203ENST00000359265 NPIPB13A6NJU9 1138 aa12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 ZNF99A8MXY4 864 aaPredicted RBP12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 NPIPB4C9JG80 1138 aa12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 ACOT7O00154 380 aa12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 SULT2B1O00204 365 aa12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 AKR7A3O95154 331 aa12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 RENP00797 406 aa12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 RFPL3SP0C7P2 107 aa12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 MYL12AP19105 171 aa12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 SLC2A5P22732 501 aa12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 DCKP27707 260 aa12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 C21orf33P30042 268 aaPredicted RBP12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 MAP2K4P45985 399 aa12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 B3GALT5-AS1P59052 145 aa12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 RPL27P61353 136 aaKnown RBP12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 CSNK2A1P68400 391 aaPredicted RBP12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 IRF3Q14653 427 aa12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 RAB39AQ14964 217 aa12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 LINC00303Q3SY05 128 aa12.42□□□□□ -0.42
PDLIM5-203ENST00000359265 KLHL12Q53G59 568 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms