RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 OR6C65A6NJZ3 312 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 KRBOX1C9JBD0 128 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 OR7A17O14581 309 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 OIP5O43482 229 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 SNCGO76070 127 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 F13BP05160 661 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 CLEC3BP05452 202 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 PVRP15151 417 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 FPR3P25089 353 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 SERPINF1P36955 418 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 SLC6A11P48066 632 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 PSMB3P49720 205 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 MRPS34P82930 218 aaKnown RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 ALKBH1Q13686 389 aaKnown RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 SELPLGQ14242 412 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 LYPD4Q6UWN0 246 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 OR2L13Q8N349 312 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 KDF1Q8NAX2 398 aaPredicted RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 LFNGQ8NES3 379 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 OR6M1Q8NGM8 313 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 ZNF583Q96ND8 569 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 LRFN5Q96NI6 719 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 SELENOIQ9C0D9 397 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 ADAM19Q9H013 955 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 SLC6A17Q9H1V8 727 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 ZCCHC4Q9H5U6 513 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 FN3KRPQ9HA64 309 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 LYRM4Q9HD34 91 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 WASH6PQ9NQA3 447 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 EXOSC3Q9NQT5 275 aaKnown RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 FAM53CQ9NYF3 392 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 KLK4Q9Y5K2 254 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 ACTL7AQ9Y615 435 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 KIR2DS1A0A191URI9 304 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 RPS10-NUDT3A0A1W2PQS6 291 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 PMS2P1A4D2B8 440 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 TMEM200CA6NKL6 621 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 H3BQ06 376 aaPredicted RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 ARHGAP33O14559 1287 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 CTNSO60931 367 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 PMS2P2O95744 297 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 SCGB1D1O95968 90 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 FOLR1P15328 257 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 DTYMKP23919 212 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 PSMB5P28074 263 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 BLVRBP30043 206 aaPredicted RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 TNFSF8P32971 234 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 KIR2DS4P43632 304 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 RPS10P46783 165 aaKnown RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 PGGT1BP53609 377 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 BIDP55957 195 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 HBA1P69905 142 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 RNF4P78317 190 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 GAB1Q13480 694 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 GALEQ14376 348 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 KIR2DS1Q14954 304 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 FAM78AQ5JUQ0 283 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 VHLLQ6RSH7 139 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 GDPD3Q7L5L3 318 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 L3MBTL4Q8NA19 623 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 ZNF439Q8NDP4 499 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 OR4F15Q8NGB8 312 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 GOT1L1Q8NHS2 421 aaPredicted RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 H1FXQ92522 213 aaKnown RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 SHARPINQ9H0F6 387 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 MOB1AQ9H8S9 216 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 CALHM2Q9HA72 323 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 SPACA1Q9HBV2 294 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 COQ3Q9NZJ6 369 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 LRP6O75581 1613 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 TRAF3IP2O43734 574 aaPredicted RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 PAPLNO95428 1278 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 GLAP06280 429 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 GM2AP17900 193 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 ANXA7P20073 488 aaKnown RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 PSMB1P20618 241 aaKnown RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 LAP3P28838 519 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 APOBEC1P41238 236 aaKnown RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 SLC1A3P43003 542 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 CSN1S1P47710 185 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 CYB561P49447 251 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 SLC5A12Q1EHB4 618 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 CDONQ4KMG0 1287 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 OGFOD3Q6PK18 319 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 ZNF813Q6ZN06 617 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 LGI3Q8N145 548 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 OR13C9Q8NGT0 318 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 ARRDC2Q8TBH0 407 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 DUSP19Q8WTR2 217 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 SECTM1Q8WVN6 248 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 ATOH1Q92858 354 aaPredicted RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 SLC35A4Q96G79 324 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 ZNF582Q96NG8 517 aaPredicted RBP5.98□□□□□ -1.45
UPF2-201ENST00000356352 MS4A8Q9BY19 250 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 OR52A1Q9UKL2 312 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 CEPT1Q9Y6K0 416 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 A0A1B0GX78 115 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 OR5H15A6NDH6 313 aa5.98□□□□□ -1.45
UPF2-201ENST00000356352 OR5H14A6NHG9 310 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms