RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 EGLN1Q9GZT9 426 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 PLEKHB1Q9UF11 243 aaPredicted RBP9.94□□□□□ -0.82
SND1-201ENST00000354725 TMEM218A2RU14 115 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 GPRIN2O60269 458 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 ENTPD6O75354 484 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 CKMP06732 381 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 GABRA1P14867 456 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 PAX1P15863 534 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 CPEP16870 476 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 ELAVL4P26378 380 aaKnown RBP9.94□□□□□ -0.82
SND1-201ENST00000354725 RPL3P39023 403 aaKnown RBP9.94□□□□□ -0.82
SND1-201ENST00000354725 BUD31P41223 144 aaPredicted RBP9.94□□□□□ -0.82
SND1-201ENST00000354725 SOX8P57073 446 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 PDGFRLQ15198 375 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 HSDL2Q6YN16 418 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 AQP11Q8NBQ7 271 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 NUDT10Q8NFP7 164 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 OR2A12Q8NGT7 310 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 SPPL2AQ8TCT8 520 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 OIT3Q8WWZ8 545 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 ATP6V0BQ99437 205 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 NLNQ9BYT8 704 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 BCO1Q9HAY6 547 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 TAAR2Q9P1P5 351 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 WNT16Q9UBV4 365 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 WNT6Q9Y6F9 365 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 TECTAO75443 2155 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 ACOT7O00154 380 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 PGRMC2O15173 223 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 OR10H3O60404 316 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 B4GALT2O60909 372 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 C1orf105O95561 183 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 SOD1P00441 154 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 S100A11P31949 105 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 VIPR1P32241 457 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 CSF2RBP32927 897 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 CDKN1BP46527 198 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 IDH2P48735 452 aaKnown RBP9.94□□□□□ -0.82
SND1-201ENST00000354725 GAGE1Q13065 139 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 ZNF628Q5EBL2 1059 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 ATPAF1Q5TC12 328 aaPredicted RBP9.94□□□□□ -0.82
SND1-201ENST00000354725 ZNF468Q5VIY5 522 aaPredicted RBP9.94□□□□□ -0.82
SND1-201ENST00000354725 HACD4Q5VWC8 232 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 KIAA1211LQ6NV74 962 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 DPPA4Q7L190 304 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 CDK20Q8IZL9 346 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 OR4K1Q8NGD4 311 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 OR52J3Q8NH60 311 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 SLC39A7Q92504 469 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 AP3S1Q92572 193 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 RCC1LQ96I51 464 aaKnown RBP9.94□□□□□ -0.82
SND1-201ENST00000354725 TRMT61BQ9BVS5 477 aaKnown RBP9.94□□□□□ -0.82
SND1-201ENST00000354725 SLC5A7Q9GZV3 580 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 PRO1933Q9H354 126 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 METTL17Q9H7H0 456 aaPredicted RBP9.94□□□□□ -0.82
SND1-201ENST00000354725 ISYNA1Q9NPH2 558 aa9.94□□□□□ -0.82
SND1-201ENST00000354725 TNRC6BQ9UPQ9 1833 aaKnown RBP9.94□□□□□ -0.82
SND1-201ENST00000354725 TRBV4-1A0A0J9YWV2 114 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 A0A1W2PRB8 838 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 AP4M1O00189 453 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 RAB5CP51148 216 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 ACTBP60709 375 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 ACTA2P62736 377 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 ACTG1P63261 375 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 ACTG2P63267 376 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 ACTC1P68032 377 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 ACTA1P68133 377 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 DMRTA1Q5VZB9 504 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 TCTN3Q6NUS6 607 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 TMEM25Q86YD3 366 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 BOD1L2Q8IYS8 172 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 ZNF480Q8WV37 535 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 RAB3CQ96E17 227 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 TMEM208Q9BTX3 173 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 TSPAN10Q9H1Z9 355 aaPredicted RBP9.93□□□□□ -0.82
SND1-201ENST00000354725 MED17Q9NVC6 651 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 MRPS18CQ9Y3D5 142 aaKnown RBP9.93□□□□□ -0.82
SND1-201ENST00000354725 FANCMQ8IYD8 2048 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 MCRIP1C9JLW8 97 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 PRODHO43272 600 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 STAG3L2P0CL84 134 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 ERGP11308 486 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 PMS2P11Q13670 270 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 NCMAPQ5T1S8 102 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 MED27Q6P2C8 311 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 TRIM40Q6P9F5 258 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 LRRN1Q6UXK5 716 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 RD3Q7Z3Z2 195 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 LILRA3Q8N6C8 439 aaPredicted RBP9.93□□□□□ -0.82
SND1-201ENST00000354725 OR2L8Q8NGY9 312 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 NUDT11Q96G61 164 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 TAAR9Q96RI9 348 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 EXOSC3Q9NQT5 275 aaKnown RBP9.93□□□□□ -0.82
SND1-201ENST00000354725 SPHK2Q9NRA0 654 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.93□□□□□ -0.82
SND1-201ENST00000354725 FAM86C1Q9NVL1 165 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 CLN6Q9NWW5 311 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 CLEC2DQ9UHP7 191 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 SNX11Q9Y5W9 270 aa9.93□□□□□ -0.82
SND1-201ENST00000354725 ATP23Q9Y6H3 246 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms