RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 HLA-DQA1Q5Y7H0 255 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 KCTD12Q96CX2 325 aaKnown RBP13.28□□□□□ -0.28
SPPL3-201ENST00000353487 PDXPQ96GD0 296 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 ZNF558Q96NG5 402 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 UBQLN3Q9H347 655 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 NTMQ9P121 344 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 GAPDHSO14556 408 aaPredicted RBP13.28□□□□□ -0.28
SPPL3-201ENST00000353487 CYB5BO43169 146 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 F10P00742 488 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 ERCC1P07992 297 aaPredicted RBP13.28□□□□□ -0.28
SPPL3-201ENST00000353487 HOXD4P09016 255 aaPredicted RBP13.28□□□□□ -0.28
SPPL3-201ENST00000353487 IFNGR1P15260 489 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 AMY2BP19961 511 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 SLC6A12P48065 614 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 GNMTQ14749 295 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 RNLSQ5VYX0 342 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 NECAP1Q8NC96 275 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 ZNF689Q96CS4 500 aaPredicted RBP13.28□□□□□ -0.28
SPPL3-201ENST00000353487 RNF170Q96K19 258 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 SPACA7Q96KW9 195 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 CNN2Q99439 309 aaKnown RBP13.28□□□□□ -0.28
SPPL3-201ENST00000353487 OR52A5Q9H2C5 316 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 C8orf33Q9H7E9 229 aaPredicted RBP13.28□□□□□ -0.28
SPPL3-201ENST00000353487 SEMA4GQ9NTN9 838 aa13.28□□□□□ -0.28
SPPL3-201ENST00000353487 ELF5Q9UKW6 265 aaPredicted RBP13.28□□□□□ -0.28
SPPL3-201ENST00000353487 DVL2O14641 736 aa13.27□□□□□ -0.28
SPPL3-201ENST00000353487 BET1O15155 118 aa13.27□□□□□ -0.28
SPPL3-201ENST00000353487 HCKP08631 526 aa13.27□□□□□ -0.28
SPPL3-201ENST00000353487 ADRB3P13945 408 aa13.27□□□□□ -0.28
SPPL3-201ENST00000353487 ZNF84P51523 738 aa13.27□□□□□ -0.28
SPPL3-201ENST00000353487 ZNF124Q15973 351 aa13.27□□□□□ -0.28
SPPL3-201ENST00000353487 ZNF836Q6ZNA1 936 aa13.27□□□□□ -0.28
SPPL3-201ENST00000353487 PXKQ7Z7A4 578 aa13.27□□□□□ -0.28
SPPL3-201ENST00000353487 CBARPQ8N350 705 aaPredicted RBP13.27□□□□□ -0.28
SPPL3-201ENST00000353487 FOXN4Q96NZ1 517 aa13.27□□□□□ -0.28
SPPL3-201ENST00000353487 SPSB2Q99619 263 aa13.27□□□□□ -0.28
SPPL3-201ENST00000353487 SLC25A32Q9H2D1 315 aa13.27□□□□□ -0.28
SPPL3-201ENST00000353487 ASB6Q9NWX5 421 aa13.27□□□□□ -0.28
SPPL3-201ENST00000353487 Q9Y3F1 56 aa13.27□□□□□ -0.28
SPPL3-201ENST00000353487 IER3IP1Q9Y5U9 82 aa13.27□□□□□ -0.28
SPPL3-201ENST00000353487 WNT6Q9Y6F9 365 aa13.27□□□□□ -0.28
SPPL3-201ENST00000353487 EMC8O43402 210 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 LGI1O95970 557 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 ASGR2P07307 311 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 C1SP09871 688 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 NAGAP17050 411 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 TEAD1P28347 426 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 ARL4DP49703 201 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 GUCA2BQ16661 112 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 DEFB134Q4QY38 66 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 ATRAIDQ6UW56 229 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 RXFP4Q8TDU9 374 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 MRPL38Q96DV4 380 aaKnown RBP13.27□□□□□ -0.29
SPPL3-201ENST00000353487 CYSLTR2Q9NS75 346 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 C11orf98E9PRG8 122 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 FFAR1O14842 300 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 ZNF354AO60765 605 aaPredicted RBP13.27□□□□□ -0.29
SPPL3-201ENST00000353487 PRAMEF4O60810 478 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 CSF1P09603 554 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 ZNF30P17039 623 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 ITGB7P26010 798 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 RFC3P40938 356 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 LTBQ06643 244 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 BAMBIQ13145 260 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 ZNF239Q16600 458 aaKnown RBP13.27□□□□□ -0.29
SPPL3-201ENST00000353487 PRAMEF9Q5VWM5 478 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 FAM71E1Q6IPT2 247 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 GPR32P1Q8NGA4 272 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 OR4K17Q8NGC6 315 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 ZNF461Q8TAF7 563 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 WFIKKN2Q8TEU8 576 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 PEX11GQ96HA9 241 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 GAREM1Q9H706 876 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 TM7SF3Q9NS93 570 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 ABRACLQ9P1F3 81 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 CAMK2AQ9UQM7 478 aa13.27□□□□□ -0.29
SPPL3-201ENST00000353487 TRAV34A0A0B4J273 112 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 HMGN4O00479 90 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 NPPBP16860 134 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 HTR1FP30939 366 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 CYCSP99999 105 aaKnown RBP13.26□□□□□ -0.29
SPPL3-201ENST00000353487 LAMTOR1Q6IAA8 161 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 OR4C11Q6IEV9 310 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 Q6ZTK2 550 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 OR2W3Q7Z3T1 314 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 TPRA1Q86W33 373 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 TMEM173Q86WV6 379 aaPredicted RBP13.26□□□□□ -0.29
SPPL3-201ENST00000353487 ZNF761Q86XN6 746 aaPredicted RBP13.26□□□□□ -0.29
SPPL3-201ENST00000353487 TMEM239Q8WW34 195 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 SCGB3A2Q96PL1 93 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 RNF208Q9H0X6 261 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 HRASLSQ9HDD0 168 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 SAGE1Q9NXZ1 904 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 MBD1Q9UIS9 605 aaPredicted RBP13.26□□□□□ -0.29
SPPL3-201ENST00000353487 GALTP07902 379 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 TYRP14679 529 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 RAB11BQ15907 218 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 LY6G5CQ5SRR4 150 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 TMEM25Q86YD3 366 aa13.26□□□□□ -0.29
SPPL3-201ENST00000353487 KLHDC8AQ8IYD2 350 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms