RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 SLC2A5P22732 501 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 MSX1P28360 303 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 IL12BP29460 328 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 IDUAP35475 653 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 CRYBB2P43320 205 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 CRYZQ08257 329 aaKnown RBP7.41□□□□□ -1.22
CD44-205ENST00000352818 NSDHLQ15738 373 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 CD226Q15762 336 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 NNATQ16517 81 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 HLA-DQA1Q5Y7H0 255 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 ZNF385CQ66K41 422 aaPredicted RBP7.41□□□□□ -1.22
CD44-205ENST00000352818 CD200R1LQ6Q8B3 271 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 THSD4Q6ZMP0 1018 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 RTL4Q6ZR62 310 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 SLC29A4Q7RTT9 530 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 OAFQ86UD1 273 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 RAB43Q86YS6 212 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 CPOQ8IVL8 374 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 CADM2Q8N3J6 435 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 KLHL36Q8N4N3 616 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 SLC15A4Q8N697 577 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 NUBPLQ8TB37 319 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 STT3BQ8TCJ2 826 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 UFD1Q92890 307 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 KISS1RQ969F8 398 aaPredicted RBP7.41□□□□□ -1.22
CD44-205ENST00000352818 EFHD2Q96C19 240 aaPredicted RBP7.41□□□□□ -1.22
CD44-205ENST00000352818 DMRTA2Q96SC8 542 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 CHCHD6Q9BRQ6 235 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 CENPOQ9BU64 300 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 OCEL1Q9H607 264 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 ERVK13-1Q9NX77 482 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 ABI3Q9P2A4 366 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 CTSFQ9UBX1 484 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 CHRNA9Q9UGM1 479 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 SLC6A5Q9Y345 797 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 CAB39Q9Y376 341 aaPredicted RBP7.41□□□□□ -1.22
CD44-205ENST00000352818 SF3B6Q9Y3B4 125 aaKnown RBP7.41□□□□□ -1.22
CD44-205ENST00000352818 ZNF337Q9Y3M9 751 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 SPTBP11277 2137 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 TRRAPQ9Y4A5 3859 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 IGKV1D-42A0A075B6H8 117 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 TRAV27A0A087WT01 109 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 LOC100506127A0A0U1RQW1 187 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 NKX2-6A6NCS4 301 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 OR6C70A6NIJ9 312 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 A8MUA0 341 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 PRR23D1E9PI22 279 aaPredicted RBP7.4□□□□□ -1.22
CD44-205ENST00000352818 SOCS6O14544 535 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 AKAP8O43823 692 aaKnown RBP7.4□□□□□ -1.22
CD44-205ENST00000352818 CDC40O60508 579 aaKnown RBP eCLIP7.4□□□□□ -1.22
CD44-205ENST00000352818 ICOSLGO75144 302 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 SLC2A10O95528 541 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 CH25HO95992 272 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 HOXD4P09016 255 aaPredicted RBP7.4□□□□□ -1.22
CD44-205ENST00000352818 TSPAN19P0C672 248 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 PRR23D2P0DMB1 279 aaPredicted RBP7.4□□□□□ -1.22
CD44-205ENST00000352818 FUT1P19526 365 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 PAICSP22234 425 aaKnown RBP7.4□□□□□ -1.22
CD44-205ENST00000352818 CD40LGP29965 261 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 FGF9P31371 208 aaPredicted RBP7.4□□□□□ -1.22
CD44-205ENST00000352818 GABRA5P31644 462 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 SOX6P35712 828 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 TGFBR1P36897 503 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 ETV6P41212 452 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 SOX3P41225 446 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 RNF144AP50876 292 aaPredicted RBP7.4□□□□□ -1.22
CD44-205ENST00000352818 DLX5P56178 289 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 PRPS1P60891 318 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 DCDP81605 110 aaKnown RBP7.4□□□□□ -1.22
CD44-205ENST00000352818 PLCXD2Q0VAA5 305 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 GPR50Q13585 617 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 GGTLC2Q14390 218 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 C11orf91Q3C1V1 193 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 KRTAP24-1Q3LI83 254 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 NKAIN1Q4KMZ8 207 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 C1orf189Q5VU69 101 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 HIST2H2BDQ6DRA6 164 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 PAQR6Q6TCH4 344 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 PAMR1Q6UXH9 720 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 DPY19L2P2Q6ZN68 376 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 C16orf47Q6ZP98 133 aaPredicted RBP7.4□□□□□ -1.22
CD44-205ENST00000352818 ANKRD37Q7Z713 158 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 IGFN1Q86VF2 1251 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 LAPTM4BQ86VI4 370 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 MISPQ8IVT2 679 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 ACBD7Q8N6N7 88 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 MINDY2Q8NBR6 621 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 NFAM1Q8NET5 270 aaPredicted RBP7.4□□□□□ -1.22
CD44-205ENST00000352818 BBS1Q8NFJ9 593 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 OR8K3Q8NH51 312 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 MCFD2Q8NI22 146 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 RNF217Q8TC41 542 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 PHOSPHO1Q8TCT1 267 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 RNF138Q8WVD3 245 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 LMF1Q96S06 567 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 MED18Q9BUE0 208 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 IFT27Q9BW83 186 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 CDADC1Q9BWV3 514 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 NDEL1Q9GZM8 345 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 ADAM19Q9H013 955 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms