RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 FBXO45P0C2W1 286 aa12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ZNF883P0CG24 379 aa12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ACKR1Q16570 336 aa12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ACSM3Q53FZ2 586 aa12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 FAM131AQ6UXB0 335 aa12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ZNF517Q6ZMY9 492 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 SLC16A9Q7RTY1 509 aa12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 NR2C2APQ86WQ0 139 aa12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 OR8H2Q8N162 312 aa12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 OR13C5Q8NGS8 318 aa12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ZNF417Q8TAU3 575 aa12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 MRPL48Q96GC5 212 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ZNF587Q96SQ5 575 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 METTL7AQ9H8H3 244 aa12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 SP140LQ9H930 580 aa12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 PPP4R1LQ9P1A2 415 aa12.75□□□□□ -0.37
CDK5RAP1-202ENST00000346416 IGHV1-45A0A0A0MS14 117 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 FABP12A6NFH5 140 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 PRR32B1ATL7 298 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 FTCDNL1E5RQL4 147 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 PSMD9O00233 223 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 PLPP3O14495 311 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 XKRYO14609 159 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 OR6A2O95222 327 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 AZGP1P25311 298 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 PTGDSP41222 190 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 APOBEC1P41238 236 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 GDI2P50395 445 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 RPL27P61353 136 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 GLYR1Q49A26 553 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 EEF1A1P5Q5VTE0 462 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 RPL22L1Q6P5R6 122 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 PXKQ7Z7A4 578 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 TIGD4Q8IY51 512 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 PM20D2Q8IYS1 436 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 SPACA9Q96E40 222 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 SRRQ9GZT4 340 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 CPAMD8Q8IZJ3 1885 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 TRBV2A0A0J9YWF9 115 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 LNP1A1A4G5 178 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 TVP23AA6NH52 213 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 BOLA2-SMG1P6H3BVE0 249 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 CELA2AP08217 269 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 CFL1P23528 166 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 PSMB10P40306 273 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 PPP3R1P63098 170 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 FOXF1Q12946 379 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ANGPT1Q15389 498 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 NTRK2Q16620 822 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 CCDC58Q4VC31 144 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 HTRA1Q92743 480 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ARL5BQ96KC2 179 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 CMKLR1Q99788 373 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 TXNIPQ9H3M7 391 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 MRPL39Q9NYK5 338 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 WIF1Q9Y5W5 379 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 B3GALT1Q9Y5Z6 326 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 HS3ST3B1Q9Y662 390 aa12.74□□□□□ -0.37
CDK5RAP1-202ENST00000346416 DKK1O94907 266 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 COX6A1P12074 109 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 IL11P20809 199 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 MYL9P24844 172 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 EDNRAP25101 427 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 MSX1P28360 303 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 DLX5P56178 289 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 DEFA1P59665 94 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 DEFA3P59666 94 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ZNF684Q5T5D7 378 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 OR2Y1Q8NGV0 311 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ZNF519Q8TB69 540 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 IMMP1LQ96LU5 166 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 PDCD1LG2Q9BQ51 273 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 NEURL2Q9BR09 285 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 TIGARQ9NQ88 270 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 SDHAF3Q9NRP4 125 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 KLHDC2Q9Y2U9 406 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 PCDHGB2Q9Y5G2 931 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 TTC28Q96AY4 2481 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 PRSS37A4D1T9 235 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 B4E171 279 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 SHISA8B8ZZ34 492 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 FLRT2O43155 660 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 HPGDSO60760 199 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ITGA10O75578 1167 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 PTTG1O95997 202 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 SERPINA3P01011 423 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 TSPAN7P41732 249 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 CASP3P42574 277 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ZNF41P51814 821 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 CDC20Q12834 499 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 INPP5JQ15735 1006 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 BAK1Q16611 211 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 AGAP7PQ5VUJ5 663 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 CDC20BQ86Y33 519 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 KDM8Q8N371 416 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 NXPE2Q96DL1 559 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ITPKCQ96DU7 683 aa12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ADAD1Q96M93 576 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ZNF700Q9H0M5 742 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms