RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 TRAPPC13A5PLN9 417 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 FAM220BPB1ANY3 271 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 ATP8B1O43520 1251 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 SHOX2O60902 331 aaPredicted RBP12.59□□□□□ -0.39
HMGN3-202ENST00000344726 SLC43A1O75387 559 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 COX4I1P13073 169 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 TUBA1BP68363 451 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 TUBA4AP68366 448 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 POU3F1Q03052 451 aaPredicted RBP12.59□□□□□ -0.39
HMGN3-202ENST00000344726 PUDPQ08623 228 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 PMS2P3Q13401 168 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 ZNF74Q16587 644 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 C11orf71Q6IPW1 123 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 ERICH5Q6P6B1 374 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 THSD4Q6ZMP0 1018 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 DNM1P46Q6ZS02 220 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 TUBA1AQ71U36 451 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 UEVLDQ8IX04 471 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 C10orf53Q8N6V4 93 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 MAPK1IP1LQ8NDC0 245 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 RP9Q8TA86 221 aaKnown RBP12.59□□□□□ -0.39
HMGN3-202ENST00000344726 RASSF5Q8WWW0 418 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 RADILQ96JH8 1075 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 ASPNQ9BXN1 380 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 ABCA1O95477 2261 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 IGHV1-18A0A0C4DH31 117 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 SLC35F4A4IF30 521 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 ZNF503-AS2A6NEH8 195 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 ATP6V1G2-DDX39BF2Z307 99 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 KPNA4O00629 521 aaPredicted RBP12.58□□□□□ -0.4
HMGN3-202ENST00000344726 CH25HO95992 272 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 WNT11O96014 354 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 MT-ATP6P00846 226 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 ACVR1BP36896 505 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 OR1E2P47887 323 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 SEC24CP53992 1094 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 ARF1P84077 181 aaKnown RBP12.58□□□□□ -0.4
HMGN3-202ENST00000344726 CLEC12BQ2HXU8 276 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 CEACAM16Q2WEN9 425 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 LRRC23Q53EV4 343 aaPredicted RBP12.58□□□□□ -0.4
HMGN3-202ENST00000344726 CYBRD1Q53TN4 286 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 CARD17Q5XLA6 110 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 HMBOX1Q6NT76 420 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 TTC33Q6PID6 262 aaPredicted RBP12.58□□□□□ -0.4
HMGN3-202ENST00000344726 KLHL24Q6TFL4 600 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 NKAIN4Q8IVV8 208 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 SLC15A3Q8IY34 581 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 MICU2Q8IYU8 434 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 LRRC17Q8N6Y2 441 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 OR2T12Q8NG77 320 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 OR5J2Q8NH18 312 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 PROX1Q92786 737 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 DHRS9Q9BPW9 319 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 GRIP2Q9C0E4 1043 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 SEC61A2Q9H9S3 476 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 CRLF2Q9HC73 371 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 MEPEQ9NQ76 525 aaPredicted RBP12.58□□□□□ -0.4
HMGN3-202ENST00000344726 POU2F3Q9UKI9 436 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 BAG5Q9UL15 447 aa12.58□□□□□ -0.4
HMGN3-202ENST00000344726 YLPM1P49750 1951 aaKnown RBP12.58□□□□□ -0.4
HMGN3-202ENST00000344726 ARPC4-TTLL3A0A0A6YYG9 625 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 RNF223E7ERA6 249 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 C11orf98E9PRG8 122 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 M0R3G1 203 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 NME4O00746 187 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 SERPINI2O75830 405 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 SEC14L2O76054 403 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 ADORA3P0DMS8 318 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 FUT4P22083 530 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 AHCYP23526 432 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 KDELR2P33947 212 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 TTKP33981 857 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 PIN1Q13526 163 aaPredicted RBP12.57□□□□□ -0.4
HMGN3-202ENST00000344726 C1QTNF12Q5T7M4 302 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 C8orf82Q6P1X6 216 aaPredicted RBP12.57□□□□□ -0.4
HMGN3-202ENST00000344726 ANKRD16Q6P6B7 361 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 DEF8Q6ZN54 512 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 SLC46A3Q7Z3Q1 461 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 SPATA21Q7Z572 469 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 PXKQ7Z7A4 578 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 MYPOPQ86VE0 399 aaPredicted RBP12.57□□□□□ -0.4
HMGN3-202ENST00000344726 C20orf196Q8IYI0 205 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 GPR137CQ8N3F9 429 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 PIK3C3Q8NEB9 887 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 MAGEE2Q8TD90 523 aaPredicted RBP12.57□□□□□ -0.4
HMGN3-202ENST00000344726 HTRA1Q92743 480 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 GTPBP3Q969Y2 492 aaKnown RBP12.57□□□□□ -0.4
HMGN3-202ENST00000344726 MPP4Q96JB8 637 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 ELAC2Q9BQ52 826 aaKnown RBP12.57□□□□□ -0.4
HMGN3-202ENST00000344726 MYLK2Q9H1R3 596 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 FKRPQ9H9S5 495 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 OBP2BQ9NPH6 170 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 TAS2R5Q9NYW4 299 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 CRNNQ9UBG3 495 aaPredicted RBP12.57□□□□□ -0.4
HMGN3-202ENST00000344726 MOKQ9UQ07 419 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 NOX1Q9Y5S8 564 aa12.57□□□□□ -0.4
HMGN3-202ENST00000344726 SONP18583 2426 aaKnown RBP12.57□□□□□ -0.4
HMGN3-202ENST00000344726 ELOVL7A1L3X0 281 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 FAM171A2A8MVW0 826 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 AKAP8O43823 692 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms