RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 AKAP11Q9UKA4 1901 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 LEUTXA8MZ59 168 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 TGOLN2O43493 480 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 BRINP1O60477 761 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 F3P13726 295 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 TACR3P29371 465 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 ARL3P36405 182 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 REEP5Q00765 189 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 RAB31Q13636 194 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 EXOSC6Q5RKV6 272 aaKnown RBP16.71■□□□□ 0.27
SMC4-201ENST00000344722 DPPA2Q7Z7J5 298 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 VRK3Q8IV63 474 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 CMTM4Q8IZR5 234 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 APH1BQ8WW43 257 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 FOXJ1Q92949 421 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 ENTPD2Q9Y5L3 495 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 ASPDHA6ND91 283 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 TMEM127O75204 238 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 SLCO2B1O94956 709 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 OR13C7P0DN81 318 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 SERPINA2P20848 420 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 SRPXP78539 464 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 GLYR1Q49A26 553 aaPredicted RBP16.71■□□□□ 0.27
SMC4-201ENST00000344722 OR5K2Q8NHB8 316 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 MEIKINA0A087WXM9 373 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 TRAPPC6AO75865 159 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 GLCEO94923 617 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 GPR75O95800 540 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 OR5M10Q6IEU7 315 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 OR8D4Q8NGM9 314 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 TTC9Q92623 222 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 INSL6Q9Y581 213 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 A0A087WUU8 490 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 TRAV20A0A0B4J274 112 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 BHLHE40O14503 412 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 BCL2L11O43521 198 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 AQP8O94778 261 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 TSPAN12O95859 305 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 F13BP05160 661 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 AFMIDQ63HM1 303 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 SLC22A24Q8N4F4 322 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 MFSD9Q8NBP5 474 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 OR1J2Q8NGS2 313 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 SMIM4Q8WVI0 70 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 CPNE4Q96A23 557 aaPredicted RBP16.7■□□□□ 0.26
SMC4-201ENST00000344722 RNF170Q96K19 258 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 PDCD1LG2Q9BQ51 273 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 SLC2A4RGQ9NR83 387 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 MAGEB4O15481 346 aaPredicted RBP16.7■□□□□ 0.26
SMC4-201ENST00000344722 ZNF865P0CJ78 1059 aaPredicted RBP16.7■□□□□ 0.26
SMC4-201ENST00000344722 LAP3P28838 519 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 CD80P33681 288 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 CLLU1OSQ5K130 101 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 HTR3DQ70Z44 454 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 OR5L2Q8NGL0 311 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 OR13C9Q8NGT0 318 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 TMED6Q8WW62 240 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 ZNF286AQ9HBT8 521 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 DFFBO76075 338 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 JTBO76095 146 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 C5AR1P21730 350 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 RPP30P78346 268 aaKnown RBP16.7■□□□□ 0.26
SMC4-201ENST00000344722 OTUD1Q5VV17 481 aaPredicted RBP16.7■□□□□ 0.26
SMC4-201ENST00000344722 ZNF620Q6ZNG0 422 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 RTP3Q9BQQ7 232 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 HINT3Q9NQE9 182 aaKnown RBP16.7■□□□□ 0.26
SMC4-201ENST00000344722 CYB5R1Q9UHQ9 305 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 NSA2O95478 260 aaKnown RBP16.7■□□□□ 0.26
SMC4-201ENST00000344722 CST6Q15828 149 aa16.7■□□□□ 0.26
SMC4-201ENST00000344722 DDX60Q8IY21 1712 aaKnown RBP16.7■□□□□ 0.26
SMC4-201ENST00000344722 UMAD1C9J7I0 102 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 B3GALT4O96024 378 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 PMP2P02689 132 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 IL5P05113 134 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 MYH9P35579 1960 aaKnown RBP16.69■□□□□ 0.26
SMC4-201ENST00000344722 RAG2P55895 527 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 OR10A3P58181 314 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 FAM209AQ5JX71 171 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 GLYATL3Q5SZD4 288 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 GABRG1Q8N1C3 465 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 SELENOIQ9C0D9 397 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 CYSLTR2Q9NS75 346 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 H7C1Q1 480 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 FABP1P07148 127 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 PSMB6P28072 239 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 IHHQ14623 411 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 EEF1A1P5Q5VTE0 462 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 ZNF836Q6ZNA1 936 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 NAXDQ8IW45 347 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 TMEM68Q96MH6 324 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 LRFN5Q96NI6 719 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 OR10A5Q9H207 317 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 OR10A2Q9H208 303 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 FBRSQ9HAH7 460 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 SPACA1Q9HBV2 294 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 TAAR2Q9P1P5 351 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 FOLR1P15328 257 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 ELOCQ15369 112 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 BAP18Q8IXM2 172 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 CMSS1Q9BQ75 279 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms