RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 GMDSO60547 372 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 CTNSO60931 367 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 EMDP50402 254 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 BTG2P78543 158 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 EEF1A2Q05639 463 aaKnown RBP11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 ZP2Q05996 745 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 GPNMBQ14956 572 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 CDK5R1Q15078 307 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 SLC9A3R2Q15599 337 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 TMEM52BQ4KMG9 183 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 SMUG1Q53HV7 270 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 TIGD3Q6B0B8 471 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 AWAT2Q6E213 333 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 DNM1P34Q6PK57 102 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 MAMDC2Q7Z304 686 aaPredicted RBP11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 SPRED2Q7Z698 418 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 OR5D18Q8NGL1 313 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 SFXN1Q9H9B4 322 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 VSX1Q9NZR4 365 aaPredicted RBP11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 PIAS3Q9Y6X2 628 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 PRAMEF27A3QJZ7 478 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 HPXP02790 462 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 CSF1P09603 554 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 RAB40ALP0C0E4 278 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 MLF2Q15773 248 aaPredicted RBP11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 ABCA11PQ4W5N1 156 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 FAM209AQ5JX71 171 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 UBE3DQ7Z6J8 389 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 ZSCAN1Q8NBB4 408 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 RAB40AQ8WXH6 277 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 PARPBPQ9NWS1 579 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 IFITM5A6NNB3 132 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 WRBO00258 174 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 FBXO24O75426 580 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 SEMA4FO95754 770 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 GPANK1O95872 356 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 SEMG1P04279 462 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 CEACAM5P06731 702 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 SPI1P17947 270 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 AGTR1P30556 359 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 SFTPDP35247 375 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF770Q6IQ21 691 aaPredicted RBP11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 STEAP1BQ6NZ63 245 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 KIRREL2Q6UWL6 708 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 TMEM91Q6ZNR0 172 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 NLRC3Q7RTR2 1065 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 OR5T2Q8NGG2 359 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 RSC1A1Q92681 617 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 SMIM19Q96E16 107 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 PELI1Q96FA3 418 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 SPACA5Q96QH8 159 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 ANKRD19PQ9H560 264 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 METTL7AQ9H8H3 244 aa11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 TDRD15B5MCY1 1934 aaKnown RBP11.41□□□□□ -0.58
SNRNP48-201ENST00000342415 A0A0J9YY10 115 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 TMEM269A0A1B0GVZ9 245 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 SERINC4A6NH21 518 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 PAPLNO95428 1278 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 CSTBP04080 98 aaKnown RBP11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 AMY2BP19961 511 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 HTR2AP28223 471 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 SNU13P55769 128 aaKnown RBP11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 TAS2R20P59543 309 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 PPP2CBP62714 309 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 PPP2CAP67775 309 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 BCL2A1Q16548 175 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 ARHGAP11BQ3KRB8 267 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 SLC22A6Q4U2R8 563 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 NHLRC1Q6VVB1 395 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 MARCH3Q86UD3 253 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 PNLDC1Q8NA58 520 aaKnown RBP11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 ST8SIA4Q92187 359 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 NXF2Q9GZY0 626 aaKnown RBP11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 ERVMER34-1Q9H9K5 563 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 C19orf53Q9UNZ5 99 aaPredicted RBP11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 SLC22A13Q9Y226 551 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 SYT7O43581 403 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 HOXB5P09067 269 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 ALKBH1Q13686 389 aaKnown RBP11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 SFRP5Q5T4F7 317 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 COMTD1Q86VU5 262 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 OR13C9Q8NGT0 318 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 HAVCR1Q96D42 359 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 NKX2-4Q9H2Z4 354 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 EMC9Q9Y3B6 208 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 A0A0B4J2A0 478 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 OTOL1A6NHN0 477 aaPredicted RBP11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 SLC2A1P11166 492 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 PGCP20142 388 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 CCNOP22674 350 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 RORAP35398 523 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 DUSP8Q13202 625 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF169Q14929 603 aaPredicted RBP11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 DEFB133Q30KQ1 61 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF585AQ6P3V2 769 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 PTP4A1Q93096 173 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF775Q96BV0 537 aaPredicted RBP11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 TOX2Q96NM4 488 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 SDHAF3Q9NRP4 125 aa11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 SHPKQ9UHJ6 478 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms