RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 CBR3O75828 277 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 MMP10P09238 476 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 CD46P15529 392 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 NTSR1P30989 418 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 TNFSF8P32971 234 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 SLC46A3Q7Z3Q1 461 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 GRASPQ7Z6J2 395 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 PELI3Q8N2H9 469 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OR9A4Q8NGU2 314 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 SEC11CQ9BY50 192 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OR51M1Q9H341 326 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 PCDHB10Q9UN67 800 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 TRBV2A0A0J9YWF9 115 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 K7EMI3 77 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 FABP7O15540 132 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 PSMB1P20618 241 aaKnown RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ARSDP51689 593 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 EXD3Q8N9H8 876 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ATP6V0BQ99437 205 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 NARFLQ9H6Q4 476 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OR2AG2A6NM03 316 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 TARM1B6A8C7 271 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 KCNK5O95279 499 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 MGMTP16455 207 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 KCNQ1P51787 676 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 PIGPP57054 158 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 GAGE1Q13065 139 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 GPM6BQ13491 265 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 FGFBP1Q14512 234 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 AARDQ4LEZ3 155 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 SCRN2Q96FV2 425 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 WFDC1Q9HC57 220 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 M0QYG6 137 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 SELENOFO60613 162 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 PREPP48147 710 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ACTA2P62736 377 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ACTG2P63267 376 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 HSF1Q00613 529 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 HSPB3Q12988 150 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 MEF2DQ14814 521 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 LIPJQ5W064 366 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 QSOX2Q6ZRP7 698 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 TAS2R10Q9NYW0 307 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 MGAT4DA6NG13 374 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 CXCR6O00574 342 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 NQO2P16083 231 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 GSK3BP49841 420 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 MEOX2P50222 304 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 IDH3GP51553 393 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 IL13RA1P78552 427 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 CNOT9Q92600 299 aaKnown RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ASF1BQ9NVP2 202 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 CACNG2Q9Y698 323 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OR2A25A4D2G3 310 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 DUXAA6NLW8 204 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 CHATP28329 748 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 CASP3P42574 277 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ARG2P78540 354 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 EXOSC2Q13868 293 aaKnown RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 XKR6Q5GH73 641 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OR2G6Q5TZ20 316 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 NPAS3Q8IXF0 933 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OR52N1Q8NH53 320 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ADGRG7Q96K78 797 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 SIRT7Q9NRC8 400 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 A0A1B0GW64 132 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 RAB29O14966 203 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ERCC1P07992 297 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 UNC50Q53HI1 259 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OR8G5Q8NG78 346 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ABCC13Q9NSE7 274 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 TRAV39A0A0B4J263 110 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 LOC105371267A0A1B0GV96 52 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 PTAFRP25105 342 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 NAA10P41227 235 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 CPZQ66K79 652 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 XAF1Q6GPH4 301 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 GEMIN6Q8WXD5 167 aaKnown RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ST6GAL2Q96JF0 529 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 LIN7CQ9NUP9 197 aaKnown RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ZNF780AO75290 641 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 SPDEFO95238 335 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ITGB5P18084 799 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 LHX2P50458 406 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ANKRD54Q6NXT1 300 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OR51D1Q8NGF3 324 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OR5M9Q8NGP3 310 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 HAO2Q9NYQ3 351 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 PI15O43692 258 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 CSF1P09603 554 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 GIFP27352 417 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 MDH2P40926 338 aaKnown RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 STARD6P59095 220 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 PLAC9Q5JTB6 97 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 C6orf136Q5SQH8 315 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OR5AK2Q8NH90 309 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 SAMD10Q9BYL1 202 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 PRR36Q9H6K5 1346 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 LINC01387J3KSC0 135 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ARG1P05089 322 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms