RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 NANOS3P60323 173 aaKnown RBP18.27■□□□□ 0.52
SPG7-202ENST00000341316 LCN6P62502 163 aa18.27■□□□□ 0.52
SPG7-202ENST00000341316 ELAVL1Q15717 326 aaKnown RBP18.27■□□□□ 0.52
SPG7-202ENST00000341316 SMAD2Q15796 467 aaKnown RBP18.27■□□□□ 0.52
SPG7-202ENST00000341316 MARCH3Q86UD3 253 aa18.27■□□□□ 0.52
SPG7-202ENST00000341316 ZNF563Q8TA94 476 aa18.27■□□□□ 0.52
SPG7-202ENST00000341316 TAAR8Q969N4 342 aa18.27■□□□□ 0.52
SPG7-202ENST00000341316 MVB12AQ96EY5 273 aa18.27■□□□□ 0.52
SPG7-202ENST00000341316 GPR137Q96N19 417 aa18.27■□□□□ 0.52
SPG7-202ENST00000341316 ADAM19Q9H013 955 aa18.27■□□□□ 0.52
SPG7-202ENST00000341316 EMC7Q9NPA0 242 aa18.27■□□□□ 0.52
SPG7-202ENST00000341316 CFAP54Q96N23 3096 aa18.27■□□□□ 0.52
SPG7-202ENST00000341316 ICMTO60725 284 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 TCRBP04435 133 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 EPXP11678 715 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 NR0B1P51843 470 aaKnown RBP18.26■□□□□ 0.51
SPG7-202ENST00000341316 RPL18Q07020 188 aaKnown RBP18.26■□□□□ 0.51
SPG7-202ENST00000341316 IL10RAQ13651 578 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 NSDHLQ15738 373 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 ZNF684Q5T5D7 378 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 ZBTB37Q5TC79 503 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 ZNF782Q6ZMW2 699 aaPredicted RBP18.26■□□□□ 0.51
SPG7-202ENST00000341316 D2HGDHQ8N465 521 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 TOMM5Q8N4H5 51 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 YIPF5Q969M3 257 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 OR51J1Q9H342 316 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 KLHDC2Q9Y2U9 406 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 NPFFR2Q9Y5X5 522 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 NUBP2Q9Y5Y2 271 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 LEUTXA8MZ59 168 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 SERPINA3P01011 423 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 GIMD1P0DJR0 217 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 SDHBP21912 280 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 SDHAP31040 664 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 DGCR2P98153 550 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 C1QL3Q5VWW1 255 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 POMZP3Q6PJE2 187 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 JAZF1Q86VZ6 243 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 SIAH3Q8IW03 269 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 ELF4Q99607 663 aaPredicted RBP18.26■□□□□ 0.51
SPG7-202ENST00000341316 LAT2Q9GZY6 243 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 ZNF304Q9HCX3 659 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 B3GNT2Q9NY97 397 aa18.26■□□□□ 0.51
SPG7-202ENST00000341316 AK6Q9Y3D8 172 aaKnown RBP18.26■□□□□ 0.51
SPG7-202ENST00000341316 ARID1BQ8NFD5 2236 aaPredicted RBP18.25■□□□□ 0.51
SPG7-202ENST00000341316 PIN1P1O15428 100 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 HCRTR2O43614 444 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 NUDT21O43809 227 aaKnown RBP18.25■□□□□ 0.51
SPG7-202ENST00000341316 SYPP08247 313 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 CXCL3P19876 107 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 FBLP22087 321 aaKnown RBP18.25■□□□□ 0.51
SPG7-202ENST00000341316 GIFP27352 417 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 PER3P56645 1201 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 HACD4Q5VWC8 232 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 SIGIRRQ6IA17 410 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 CHRDL2Q6WN34 429 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 SDR16C5Q8N3Y7 309 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 OR11H4Q8NGC9 324 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 OIT3Q8WWZ8 545 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 TSPAN32Q96QS1 320 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 ZCCHC4Q9H5U6 513 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 SRA1Q9HD15 236 aaKnown RBP18.25■□□□□ 0.51
SPG7-202ENST00000341316 MRPL39Q9NYK5 338 aaKnown RBP18.25■□□□□ 0.51
SPG7-202ENST00000341316 MRPS7Q9Y2R9 242 aaKnown RBP18.25■□□□□ 0.51
SPG7-202ENST00000341316 KHNYNO15037 678 aaKnown RBP18.25■□□□□ 0.51
SPG7-202ENST00000341316 ANXA3P12429 323 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 SLC25A1P53007 311 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 ESCO2Q56NI9 601 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 MESTQ5EB52 335 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 UNQ9370/PRO34162Q6UXP9 181 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 PLXDC1Q8IUK5 500 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 SUN5Q8TC36 379 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 RGP1Q92546 391 aaPredicted RBP18.25■□□□□ 0.51
SPG7-202ENST00000341316 ZFP3Q96NJ6 502 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 VN1R1Q9GZP7 353 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 RANBP3Q9H6Z4 567 aaPredicted RBP18.25■□□□□ 0.51
SPG7-202ENST00000341316 DIABLOQ9NR28 239 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 RXFP3Q9NSD7 469 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 MRPS17Q9Y2R5 130 aaKnown RBP18.25■□□□□ 0.51
SPG7-202ENST00000341316 ALPK2Q86TB3 2170 aa18.25■□□□□ 0.51
SPG7-202ENST00000341316 FLRT2O43155 660 aa18.24■□□□□ 0.51
SPG7-202ENST00000341316 TSPAN2O60636 221 aa18.24■□□□□ 0.51
SPG7-202ENST00000341316 APEHP13798 732 aaKnown RBP18.24■□□□□ 0.51
SPG7-202ENST00000341316 IL12BP29460 328 aa18.24■□□□□ 0.51
SPG7-202ENST00000341316 CCR6P51684 374 aa18.24■□□□□ 0.51
SPG7-202ENST00000341316 CD276Q5ZPR3 534 aa18.24■□□□□ 0.51
SPG7-202ENST00000341316 SHISA6Q6ZSJ9 500 aa18.24■□□□□ 0.51
SPG7-202ENST00000341316 ESPNLQ6ZVH7 1005 aa18.24■□□□□ 0.51
SPG7-202ENST00000341316 CCDC28AQ8IWP9 274 aa18.24■□□□□ 0.51
SPG7-202ENST00000341316 C7orf57Q8NEG2 295 aa18.24■□□□□ 0.51
SPG7-202ENST00000341316 RPS4Y2Q8TD47 263 aa18.24■□□□□ 0.51
SPG7-202ENST00000341316 SLC41A2Q96JW4 573 aa18.24■□□□□ 0.51
SPG7-202ENST00000341316 WWTR1Q9GZV5 400 aa18.24■□□□□ 0.51
SPG7-202ENST00000341316 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.24■□□□□ 0.51
SPG7-202ENST00000341316 NOX4Q9NPH5 578 aa18.24■□□□□ 0.51
SPG7-202ENST00000341316 ELF5Q9UKW6 265 aaPredicted RBP18.24■□□□□ 0.51
SPG7-202ENST00000341316 COL6A3P12111 3177 aa18.24■□□□□ 0.51
SPG7-202ENST00000341316 TMEM72A0PK05 275 aa18.24■□□□□ 0.51
SPG7-202ENST00000341316 MEN1O00255 615 aa18.24■□□□□ 0.51
SPG7-202ENST00000341316 DUX1O43812 170 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms