RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 OR2J1Q9GZK6 312 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 MBNL1Q9NR56 388 aaKnown RBP3.83□□□□□ -1.8
NEDD4-201ENST00000338963 GPR55Q9Y2T6 319 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-201ENST00000338963 MRPS2Q9Y399 296 aaKnown RBP3.83□□□□□ -1.8
NEDD4-201ENST00000338963 RIMBP3Q9UFD9 1639 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 AKAP12Q02952 1782 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 F5H5T6 163 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 F8VVB4 439 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 F8VWA3 439 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 RAMP3O60896 148 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 MTX2O75431 263 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 SYNGR4O95473 234 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 ADCYAP1P18509 176 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 THBS3P49746 956 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 HMGA2P52926 109 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 MAXP61244 160 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 PAFAH1B2P68402 229 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF699Q32M78 642 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 DCST1Q5T197 706 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 Q6ZTK2 550 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 C4orf19Q8IY42 314 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 FAM24BQ8N5W8 94 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 FRMD1Q8N878 549 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 BHLHE23Q8NDY6 225 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 OR4S1Q8NGB4 309 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 OR51D1Q8NGF3 324 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 RHBDD1Q8TEB9 315 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 GHSRQ92847 366 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 NSUN4Q96CB9 384 aaKnown RBP3.83□□□□□ -1.8
NEDD4-201ENST00000338963 CPNE2Q96FN4 548 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-201ENST00000338963 LRRC3BQ96PB8 259 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 F2RL3Q96RI0 385 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 RHNO1Q9BSD3 238 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 BET1LQ9NYM9 111 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 CDHR4A6H8M9 788 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 IDSB3KWA1 339 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 SRPX2O60687 465 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-201ENST00000338963 IGHA2P01877 340 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 SLC35E2P0CK97 266 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 DRD5P21918 477 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 ACHEP22303 614 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 MST1P26927 711 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 CHRNB4P30926 498 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 RPS26P62854 115 aaKnown RBP3.83□□□□□ -1.8
NEDD4-201ENST00000338963 PTSQ03393 145 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 TXNRD3NBQ6F5E7 133 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 OR2A2Q6IF42 318 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 ABHD15Q6UXT9 468 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 TMIGD1Q6UXZ0 262 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 HEPN1Q6WQI6 88 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 PLPPR4Q7Z2D5 763 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 OR4K17Q8NGC6 315 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 ZCCHC10Q8TBK6 192 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 GPX8Q8TED1 209 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 THAP4Q8WY91 577 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 SAMD8Q96LT4 415 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 SLC6A7Q99884 636 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 SLC35B3Q9H1N7 401 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 SLC2A9Q9NRM0 540 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 FTSJ1Q9UET6 329 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 SERGEFQ9UGK8 458 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 PARP4Q9UKK3 1724 aaKnown RBP3.83□□□□□ -1.8
NEDD4-201ENST00000338963 PRR36Q9H6K5 1346 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 TRAV1-2A0A0B4J238 106 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 hCG_1809904A0A1W2PP81 198 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 A0A1W2PR64 198 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 A0A1W2PRV1 198 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 CLDN34H7C241 214 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 SULT2B1O00204 365 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 MT-CO2P00403 227 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 CD1AP06126 327 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 ITGB5P18084 799 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 NFYBP25208 207 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 EPHA2P29317 976 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 EMP2P54851 167 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 ERVPABLB-1P60509 514 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 RPL23AP62750 156 aaKnown RBP3.83□□□□□ -1.8
NEDD4-201ENST00000338963 PRDX4Q13162 271 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 MEF2DQ14814 521 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 LINC01551Q86U37 167 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 H1FOOQ8IZA3 346 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-201ENST00000338963 C17orf47Q8NEP4 570 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 MS4A8Q9BY19 250 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 CDCP1Q9H5V8 836 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 CYP8B1Q9UNU6 501 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 A0A0B4J2A0 478 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 KIR2DL5BA0A0G2JN68 375 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 KIR2DL5BA0A0G2JPC4 375 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 ANKRD20A5PA0PJZ0 165 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 DHRS7CA6NNS2 312 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 H7BY64 318 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 PSMD10O75832 226 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 KNG1P01042 644 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 CRYGCP07315 174 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 EFNA3P52797 238 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 RPS14P62263 151 aaKnown RBP3.83□□□□□ -1.8
NEDD4-201ENST00000338963 GPM6BQ13491 265 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 PAFAH1B3Q15102 231 aaKnown RBP3.83□□□□□ -1.8
NEDD4-201ENST00000338963 TCTN1Q2MV58 587 aa3.83□□□□□ -1.8
NEDD4-201ENST00000338963 SLC27A1Q6PCB7 646 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms