RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TBRG1Q3YBR2 411 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 ZNF672Q499Z4 452 aaPredicted RBP13.35□□□□□ -0.27
PRKN-201ENST00000338468 CLEC9AQ6UXN8 241 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 ABHD12BQ7Z5M8 362 aaPredicted RBP13.35□□□□□ -0.27
PRKN-201ENST00000338468 TSEN54Q7Z6J9 526 aaKnown RBP13.35□□□□□ -0.27
PRKN-201ENST00000338468 PXKQ7Z7A4 578 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 RBM15BQ8NDT2 890 aaKnown RBP13.35□□□□□ -0.27
PRKN-201ENST00000338468 BCL2L2Q92843 193 aaPredicted RBP13.35□□□□□ -0.27
PRKN-201ENST00000338468 PIGTQ969N2 578 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 CCT8L2Q96SF2 557 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 KCTD14Q9BQ13 255 aaPredicted RBP13.35□□□□□ -0.27
PRKN-201ENST00000338468 C1QTNF6Q9BXI9 259 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 GPR35Q9HC97 309 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 SPAG4Q9NPE6 437 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 C20orf141Q9NUB4 165 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 ZNF229Q9UJW7 825 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 NOX1Q9Y5S8 564 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 SLC35F4A4IF30 521 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 FAM171A2A8MVW0 826 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 C11orf98E9PRG8 122 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 J3KTA2 159 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 NDUFAB1O14561 156 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 ABCD4O14678 606 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 GSTA4O15217 222 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 KRT33AO76009 404 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 PRSS23O95084 383 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 SERPINA1P01009 418 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 MT-ND1P03886 318 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 DANCRP0C864 163 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 ADORA3P0DMS8 318 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 THRBP10828 461 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 CD40P25942 277 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 C20orf196Q8IYI0 205 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 RNF148Q8N7C7 305 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 ANKS4BQ8N8V4 417 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 ANKK1Q8NFD2 765 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 TMEM239Q8WW34 195 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 PRRC1Q96M27 445 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 LRRC37BQ96QE4 947 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 NANSQ9NR45 359 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 MAN2C1Q9NTJ4 1040 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 EGFL7Q9UHF1 273 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 TAGLN3Q9UI15 199 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 AMDHD2Q9Y303 409 aa13.34□□□□□ -0.27
PRKN-201ENST00000338468 PLCE1Q9P212 2302 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 M0R1B8 84 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 PIP5K1CO60331 668 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 SMPD2O60906 423 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 ZNF682O95780 498 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 IGF2P01344 180 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 HEXAP06865 529 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 SOD3P08294 240 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 IFNGR1P15260 489 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 AHCYP23526 432 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 PTAFRP25105 342 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 YAP1P46937 504 aaKnown RBP13.33□□□□□ -0.28
PRKN-201ENST00000338468 ARF1P84077 181 aaKnown RBP13.33□□□□□ -0.28
PRKN-201ENST00000338468 FXNQ16595 210 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 PGGHGQ32M88 737 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 CARD17Q5XLA6 110 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 HMBOX1Q6NT76 420 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 ANKRD16Q6P6B7 361 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 TMEM108Q6UXF1 575 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 B3GLCTQ6Y288 498 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 LRRC75A-AS1Q8N1F1 130 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 FAM156AQ8NDB6 213 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 PIK3C3Q8NEB9 887 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 MAGEE2Q8TD90 523 aaPredicted RBP13.33□□□□□ -0.28
PRKN-201ENST00000338468 LIPHQ8WWY8 451 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 GEMIN6Q8WXD5 167 aaKnown RBP13.33□□□□□ -0.28
PRKN-201ENST00000338468 LZICQ8WZA0 190 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 FBXW5Q969U6 566 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 HSH2DQ96JZ2 352 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 LRR1Q96L50 414 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 CRLF2Q9HC73 371 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 ARID1AO14497 2285 aa13.33□□□□□ -0.28
PRKN-201ENST00000338468 FN1P02751 2386 aaKnown RBP13.32□□□□□ -0.28
PRKN-201ENST00000338468 A0A096LPE4 126 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 ARPC4-TTLL3A0A0A6YYG9 625 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 A0A1W2PPZ6 126 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 ZNF503-AS2A6NEH8 195 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 M0R3G1 203 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 AKAP8O43823 692 aaKnown RBP13.32□□□□□ -0.28
PRKN-201ENST00000338468 SERPINI2O75830 405 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 DCTN3O75935 186 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 OR7A10O76100 309 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 IFNW1P05000 195 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 TSPAN19P0C672 248 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 PAX1P15863 534 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 FUT1P19526 365 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 SH3BGRP55822 239 aaPredicted RBP13.32□□□□□ -0.28
PRKN-201ENST00000338468 PRPS1P60891 318 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 TUBA1BP68363 451 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 TUBA4AP68366 448 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 NKX6-1P78426 367 aaPredicted RBP13.32□□□□□ -0.28
PRKN-201ENST00000338468 ST3GAL3Q11203 375 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 CAMK2DQ13557 499 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 CEACAM16Q2WEN9 425 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 IFI44LQ53G44 452 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 C1QTNF12Q5T7M4 302 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms