RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 BCL10O95999 233 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 ADAP00813 363 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 HLA-DOBP13765 273 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 ANXA8P13928 327 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 NTF4P34130 210 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 DAP3P51398 398 aaKnown RBP13.62□□□□□ -0.23
SEC13-201ENST00000337354 CLDN17P56750 224 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 FHL1Q13642 323 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 RPL13AP3Q6NVV1 102 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 TFAP2EQ6VUC0 442 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 SLC35D2Q76EJ3 337 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 HDDC2Q7Z4H3 204 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 TMEM179BQ7Z7N9 219 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 MEX3DQ86XN8 651 aaKnown RBP13.62□□□□□ -0.23
SEC13-201ENST00000337354 ZDHHC13Q8IUH4 622 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 SVOPLQ8N434 492 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 POMGNT2Q8NAT1 580 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 FEVQ99581 238 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 ZNF556Q9HAH1 456 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 STX18Q9P2W9 335 aaKnown RBP13.62□□□□□ -0.23
SEC13-201ENST00000337354 HECTD1Q9ULT8 2610 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 PHF3Q92576 2039 aaKnown RBP13.62□□□□□ -0.23
SEC13-201ENST00000337354 ASH1LQ9NR48 2969 aaKnown RBP13.62□□□□□ -0.23
SEC13-201ENST00000337354 FAM90A27PA6NNH2 459 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 G3V2T6 193 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 F13BP05160 661 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 IFNGR1P15260 489 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 CDSNQ15517 529 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 RFX4Q33E94 735 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 FBXW9Q5XUX1 488 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 NIPAL3Q6P499 406 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 ZNF474Q6S9Z5 364 aaPredicted RBP13.61□□□□□ -0.23
SEC13-201ENST00000337354 SMARCD3Q6STE5 483 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 CASP12Q6UXS9 341 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 DPY19L2P2Q6ZN68 376 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 RASSF6Q6ZTQ3 369 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 AMIGO2Q86SJ2 522 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 LUZP2Q86TE4 346 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 CLDN22Q8N7P3 220 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 LRRC75AQ8NAA5 344 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 OR6X1Q8NH79 312 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 MOSPD2Q8NHP6 518 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 DNAJC9Q8WXX5 260 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 RNASE6Q93091 150 aaKnown RBP13.61□□□□□ -0.23
SEC13-201ENST00000337354 LRR1Q96L50 414 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 PSMG3-AS1Q96PY0 264 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 RBM24Q9BX46 236 aaKnown RBP13.61□□□□□ -0.23
SEC13-201ENST00000337354 OSBPL10Q9BXB5 764 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 OPN3Q9H1Y3 402 aaPredicted RBP13.61□□□□□ -0.23
SEC13-201ENST00000337354 TXNIPQ9H3M7 391 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 MCCC2Q9HCC0 563 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 PLEKHB1Q9UF11 243 aaPredicted RBP13.61□□□□□ -0.23
SEC13-201ENST00000337354 ARHGAP21Q5T5U3 1957 aa13.61□□□□□ -0.23
SEC13-201ENST00000337354 DOPEY1Q5JWR5 2465 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 SLC35F4A4IF30 521 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 CENPBD1B2RD01 187 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 RRP9O43818 475 aaKnown RBP13.6□□□□□ -0.23
SEC13-201ENST00000337354 SLC43A1O75387 559 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 SERPINI2O75830 405 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 ZNF432O94892 652 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 CD14P08571 375 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 APEHP13798 732 aaKnown RBP13.6□□□□□ -0.23
SEC13-201ENST00000337354 POU2F1P14859 743 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 RPL4P36578 427 aaKnown RBP13.6□□□□□ -0.23
SEC13-201ENST00000337354 PEX19P40855 299 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 CTXN1P60606 82 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 P2RY6Q15077 328 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 ACKR1Q16570 336 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 Q6ZT83 130 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 ABHD12BQ7Z5M8 362 aaPredicted RBP13.6□□□□□ -0.23
SEC13-201ENST00000337354 SLC25A44Q96H78 314 aaPredicted RBP13.6□□□□□ -0.23
SEC13-201ENST00000337354 TXNDC15Q96J42 360 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 GPX7Q96SL4 187 aaPredicted RBP13.6□□□□□ -0.23
SEC13-201ENST00000337354 PKP2Q99959 881 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 HDHD5Q9BXW7 423 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 LINC00470Q9BZP3 86 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 ASB6Q9NWX5 421 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 MED29Q9NX70 200 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 IL20Q9NYY1 176 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 UPB1Q9UBR1 384 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 COL12A1Q99715 3063 aa13.6□□□□□ -0.23
SEC13-201ENST00000337354 NKX2-6A6NCS4 301 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 MCIDASD6RGH6 385 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 IGHMP01871 453 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 ZNF23P17027 643 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 SLC6A6P31641 620 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 SELENOPP49908 381 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 TFF3Q07654 80 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 ARMC4Q5T2S8 1044 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 TSPO2Q5TGU0 170 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 FAM205BPQ63HN1 556 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 GPR139Q6DWJ6 353 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 HMBOX1Q6NT76 420 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 ZNF771Q7L3S4 317 aaPredicted RBP13.59□□□□□ -0.23
SEC13-201ENST00000337354 KIF18BQ86Y91 864 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 GABRG1Q8N1C3 465 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 UBE2J2Q8N2K1 259 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 ATG16L2Q8NAA4 619 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 GTPBP3Q969Y2 492 aaKnown RBP13.59□□□□□ -0.23
SEC13-201ENST00000337354 OR2M2Q96R28 347 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms