RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ARRDC2Q8TBH0 407 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 ALG12Q9BV10 488 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 ARL2-SNX15V9GYD0 113 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 LRRC37A3O60309 1634 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 EIF4EP06730 217 aaKnown RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 OR10J4P0C629 311 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 MAKP20794 623 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 ADRA1AP35348 466 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 CTSCP53634 463 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 SUMO1P63165 101 aaKnown RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 CTBSQ01459 385 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 SLC51BQ86UW2 128 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 DMBX1Q8NFW5 382 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 OR4A16Q8NH70 328 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 TPPP3Q9BW30 176 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 LINC00597Q9H2U6 94 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 ZNF593O00488 134 aaPredicted RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 ARHGAP33O14559 1287 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 GPR171O14626 319 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 SLC31A2O15432 143 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 SMAD6O43541 496 aaKnown RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 HTR1FP30939 366 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 GDNFP39905 211 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 SYPL1Q16563 259 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 C19orf35Q6ZS72 473 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 AAED1Q7RTV5 226 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 DNAJC5GQ8N7S2 189 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 OR4F15Q8NGB8 312 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 OR52N1Q8NH53 320 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 MARC2Q969Z3 335 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 TOE1Q96GM8 510 aaKnown RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 SGPP1Q9BX95 441 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 NKX6-2Q9C056 277 aaPredicted RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 ADAMTS5Q9UNA0 930 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 K7EQM0 130 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 GFRA2O00451 464 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 PMS2P2O95744 297 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 HBA1P69905 142 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 C17orf67Q0P5P2 114 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 AGBL5Q8NDL9 886 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 OR8U1Q8NH10 309 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 FBXO27Q8NI29 283 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 ZNRF4Q8WWF5 429 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 HRASLS5Q96KN8 279 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 ZNF251Q9BRH9 671 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 SORBS1Q9BX66 1292 aaKnown RBP12.13□□□□□ -0.47
HLCS-201ENST00000336648 SLC35D1Q9NTN3 355 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 SLC23A2Q9UGH3 650 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 CHRNA9Q9UGM1 479 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 MRPS28Q9Y2Q9 187 aaKnown RBP12.13□□□□□ -0.47
HLCS-201ENST00000336648 TMEM200CA6NKL6 621 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 KDM4EB2RXH2 506 aaPredicted RBP12.13□□□□□ -0.47
HLCS-201ENST00000336648 B4GAT1O43505 415 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 FCGR2AP12318 317 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 MFAP5Q13361 173 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 LYPD4Q6UWN0 246 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 OR2T11Q8NH01 316 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 DUSP19Q8WTR2 217 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 RAB22AQ9UL26 194 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 FMN2Q9NZ56 1722 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 ZNF728P0DKX0 622 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 OR1D4P47884 311 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 REEP5Q00765 189 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 PMPCAQ10713 525 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 SPCS2Q15005 226 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 SLC9A3R2Q15599 337 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 KPTNQ9Y664 436 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 C21orf33P30042 268 aaPredicted RBP12.13□□□□□ -0.47
HLCS-201ENST00000336648 ERVFC1P60507 584 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 AKR1C1Q04828 323 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 RAB6CQ53S08 254 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 FAM162BQ5T6X4 162 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 RNLSQ5VYX0 342 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 OR6M1Q8NGM8 313 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 TMEM40Q8WWA1 233 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 RAB6CQ9H0N0 254 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 GAR1Q9NY12 217 aaKnown RBP12.13□□□□□ -0.47
HLCS-201ENST00000336648 PRSS21Q9Y6M0 314 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 OR7C1O76099 320 aaPredicted RBP12.13□□□□□ -0.47
HLCS-201ENST00000336648 CEBPBP17676 345 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 FPR3P25089 353 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 SSR4P51571 173 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 ENTHD1Q8IYW4 607 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 C19orf47Q8N9M1 422 aaKnown RBP12.13□□□□□ -0.47
HLCS-201ENST00000336648 CRYGNQ8WXF5 182 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 SHISA4Q96DD7 197 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 ARSGQ96EG1 525 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 TAAR2Q9P1P5 351 aa12.13□□□□□ -0.47
HLCS-201ENST00000336648 GYPBP06028 91 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 GABRA2P47869 451 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 Q1RN00 199 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 ARHGAP11BQ3KRB8 267 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 SFXN4Q6P4A7 337 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 ZNF836Q6ZNA1 936 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 MDGA2Q7Z553 956 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 GRAMD2AQ8IUY3 354 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 ARV1Q9H2C2 271 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 LRIT1Q9P2V4 623 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 SULT1C4O75897 302 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 S100A8P05109 93 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms