RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 FBXW5Q969U6 566 aa13.04□□□□□ -0.32
KATNA1-201ENST00000335643 FKRPQ9H9S5 495 aa13.04□□□□□ -0.32
KATNA1-201ENST00000335643 CRLF2Q9HC73 371 aa13.04□□□□□ -0.32
KATNA1-201ENST00000335643 GPR35Q9HC97 309 aa13.04□□□□□ -0.32
KATNA1-201ENST00000335643 DLL4Q9NR61 685 aa13.04□□□□□ -0.32
KATNA1-201ENST00000335643 ARL8BQ9NVJ2 186 aa13.04□□□□□ -0.32
KATNA1-201ENST00000335643 RHCGQ9UBD6 479 aa13.04□□□□□ -0.32
KATNA1-201ENST00000335643 MAGED1Q9Y5V3 778 aaPredicted RBP13.04□□□□□ -0.32
KATNA1-201ENST00000335643 NIPBLQ6KC79 2804 aaeCLIP13.04□□□□□ -0.32
KATNA1-201ENST00000335643 USF3Q68DE3 2245 aa13.04□□□□□ -0.32
KATNA1-201ENST00000335643 PLCE1Q9P212 2302 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 RPL36A-HNRNPH2H7BZ11 118 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 M0R3G1 203 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 FFAR1O14842 300 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 SMPD2O60906 423 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 SERPINA1P01009 418 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 CD8AP01732 235 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 MT-ND1P03886 318 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 FUT1P19526 365 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 ARF1P84077 181 aaKnown RBP13.03□□□□□ -0.32
KATNA1-201ENST00000335643 CEACAM16Q2WEN9 425 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 Q5PR19 223 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 TMEM108Q6UXF1 575 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 TSEN54Q7Z6J9 526 aaKnown RBP13.03□□□□□ -0.32
KATNA1-201ENST00000335643 PXKQ7Z7A4 578 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 FAM156AQ8NDB6 213 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 SLC19A3Q9BZV2 496 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 SEC61A2Q9H9S3 476 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 NANSQ9NR45 359 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 MAN2C1Q9NTJ4 1040 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 EGFL7Q9UHF1 273 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 AP3M1Q9Y2T2 418 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 AMDHD2Q9Y303 409 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 NOX1Q9Y5S8 564 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 SETD2Q9BYW2 2564 aaPredicted RBP13.03□□□□□ -0.32
KATNA1-201ENST00000335643 OR6C65A6NJZ3 312 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 E7EQL1 145 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 DYNC1I1O14576 645 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 ZNF682O95780 498 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 CD99P14209 185 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 IFNGR1P15260 489 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 PTAFRP25105 342 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 PTH2RP49190 550 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 CDH11P55287 796 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 CAMK2DQ13557 499 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 MELKQ14680 651 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 HMBOX1Q6NT76 420 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 ABHD12BQ7Z5M8 362 aaPredicted RBP13.03□□□□□ -0.32
KATNA1-201ENST00000335643 MYPOPQ86VE0 399 aaPredicted RBP13.03□□□□□ -0.32
KATNA1-201ENST00000335643 C20orf196Q8IYI0 205 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 LRRC75A-AS1Q8N1F1 130 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 SMAP2Q8WU79 429 aaPredicted RBP13.03□□□□□ -0.32
KATNA1-201ENST00000335643 TMEM239Q8WW34 195 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 HSH2DQ96JZ2 352 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 KCTD14Q9BQ13 255 aaPredicted RBP13.03□□□□□ -0.32
KATNA1-201ENST00000335643 CISD1Q9NZ45 108 aaKnown RBP13.03□□□□□ -0.32
KATNA1-201ENST00000335643 ZNF229Q9UJW7 825 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 ARL2BPQ9Y2Y0 163 aa13.03□□□□□ -0.32
KATNA1-201ENST00000335643 HEATR1Q9H583 2144 aaKnown RBP13.02□□□□□ -0.32
KATNA1-201ENST00000335643 IGHV1-18A0A0C4DH31 117 aa13.02□□□□□ -0.33
KATNA1-201ENST00000335643 GSTA4O15217 222 aa13.02□□□□□ -0.33
KATNA1-201ENST00000335643 PRSS23O95084 383 aa13.02□□□□□ -0.33
KATNA1-201ENST00000335643 CDKN1AP38936 164 aa13.02□□□□□ -0.33
KATNA1-201ENST00000335643 BIDP55957 195 aa13.02□□□□□ -0.33
KATNA1-201ENST00000335643 PRPS1P60891 318 aa13.02□□□□□ -0.33
KATNA1-201ENST00000335643 SSX8Q7RTT4 187 aa13.02□□□□□ -0.33
KATNA1-201ENST00000335643 MEX3DQ86XN8 651 aaKnown RBP13.02□□□□□ -0.33
KATNA1-201ENST00000335643 GPR137CQ8N3F9 429 aa13.02□□□□□ -0.33
KATNA1-201ENST00000335643 FAM86B1Q8N7N1 296 aa13.02□□□□□ -0.33
KATNA1-201ENST00000335643 PIK3C3Q8NEB9 887 aa13.02□□□□□ -0.33
KATNA1-201ENST00000335643 TMEM171Q8WVE6 324 aa13.02□□□□□ -0.33
KATNA1-201ENST00000335643 PRRC1Q96M27 445 aa13.02□□□□□ -0.33
KATNA1-201ENST00000335643 GSX2Q9BZM3 304 aa13.02□□□□□ -0.33
KATNA1-201ENST00000335643 POLR2J2Q9GZM3 115 aaKnown RBP13.02□□□□□ -0.33
KATNA1-201ENST00000335643 POLR2J3Q9H1A7 115 aaKnown RBP13.02□□□□□ -0.33
KATNA1-201ENST00000335643 SPAG4Q9NPE6 437 aa13.02□□□□□ -0.33
KATNA1-201ENST00000335643 ZNF701Q9NV72 531 aaPredicted RBP13.02□□□□□ -0.33
KATNA1-201ENST00000335643 ATP6V1G2-DDX39BF2Z307 99 aa13.01□□□□□ -0.33
KATNA1-201ENST00000335643 OVOL3O00110 214 aa13.01□□□□□ -0.33
KATNA1-201ENST00000335643 RNF13O43567 381 aa13.01□□□□□ -0.33
KATNA1-201ENST00000335643 UMPSP11172 480 aa13.01□□□□□ -0.33
KATNA1-201ENST00000335643 PAX1P15863 534 aa13.01□□□□□ -0.33
KATNA1-201ENST00000335643 RBM34P42696 430 aaKnown RBP13.01□□□□□ -0.33
KATNA1-201ENST00000335643 ZP4Q12836 540 aa13.01□□□□□ -0.33
KATNA1-201ENST00000335643 ANKRD16Q6P6B7 361 aa13.01□□□□□ -0.33
KATNA1-201ENST00000335643 SLC22A25Q6T423 547 aa13.01□□□□□ -0.33
KATNA1-201ENST00000335643 KLHL17Q6TDP4 642 aa13.01□□□□□ -0.33
KATNA1-201ENST00000335643 SLC35D2Q76EJ3 337 aa13.01□□□□□ -0.33
KATNA1-201ENST00000335643 ARPC4-TTLL3A0A0A6YYG9 625 aa13□□□□□ -0.33
KATNA1-201ENST00000335643 ZNF99A8MXY4 864 aaPredicted RBP13□□□□□ -0.33
KATNA1-201ENST00000335643 BLOC1S5-TXNDC5H3BN57 136 aa13□□□□□ -0.33
KATNA1-201ENST00000335643 AKAP8O43823 692 aaKnown RBP13□□□□□ -0.33
KATNA1-201ENST00000335643 NDUFS7O75251 213 aa13□□□□□ -0.33
KATNA1-201ENST00000335643 OR7A10O76100 309 aa13□□□□□ -0.33
KATNA1-201ENST00000335643 IFNW1P05000 195 aa13□□□□□ -0.33
KATNA1-201ENST00000335643 F13BP05160 661 aa13□□□□□ -0.33
KATNA1-201ENST00000335643 CELA3BP08861 270 aa13□□□□□ -0.33
KATNA1-201ENST00000335643 THRBP10828 461 aa13□□□□□ -0.33
KATNA1-201ENST00000335643 MSX2P35548 267 aaPredicted RBP13□□□□□ -0.33
KATNA1-201ENST00000335643 RPS4XP62701 263 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms