RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 KLF4O43474 513 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 FRS3O43559 492 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 TLX2O43763 284 aaPredicted RBP8.56□□□□□ -1.04
C11orf54-201ENST00000331239 RAB36O95755 333 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 APOA1P02647 267 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 THY1P04216 161 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 SPNP16150 400 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 DNASE1L1P49184 302 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 TSPAN31Q12999 210 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 GINS1Q14691 196 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 LINC00303Q3SY05 128 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 SLC25A30Q5SVS4 291 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 GALNTL5Q7Z4T8 443 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 HMGN2P46Q86SG4 172 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 RBMXL3Q8N7X1 1067 aaKnown RBP8.56□□□□□ -1.04
C11orf54-201ENST00000331239 ANKK1Q8NFD2 765 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 ABHD17AQ96GS6 310 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 LRR1Q96L50 414 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 ARHGAP9Q9BRR9 750 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 FKRPQ9H9S5 495 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 FANCFQ9NPI8 374 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 FBXL2Q9UKC9 423 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 NTNG1Q9Y2I2 539 aa8.56□□□□□ -1.04
C11orf54-201ENST00000331239 LOC102725191A0A1B0GVB3 256 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 GNB5O14775 395 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 SEC14L5O43304 696 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 PMS2P2O95744 297 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 TSPAN19P0C672 248 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 MST1P26927 711 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 CRYBB2P43320 205 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 SMSP52788 366 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 B3GALT5-AS1P59052 145 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 PPIAP62937 165 aaKnown RBP8.55□□□□□ -1.04
C11orf54-201ENST00000331239 PLGLB1Q02325 96 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 PAQR6Q6TCH4 344 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 CCBE1Q6UXH8 406 aaPredicted RBP8.55□□□□□ -1.04
C11orf54-201ENST00000331239 RASSF6Q6ZTQ3 369 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 OR52I1Q8NGK6 324 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 POC1BQ8TC44 478 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 TRMT61AQ96FX7 289 aaKnown RBP8.55□□□□□ -1.04
C11orf54-201ENST00000331239 SIAEQ9HAT2 523 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 CTPS2Q9NRF8 586 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 BAIAP2Q9UQB8 552 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 OR14I1A6ND48 311 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 NPIPB13A6NJU9 1138 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 NPIPB4C9JG80 1138 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 RGS5O15539 181 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 EIF1BO60739 113 aaKnown RBP8.55□□□□□ -1.04
C11orf54-201ENST00000331239 RCBTB2O95199 551 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 MYL12AP19105 171 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 GDF1P27539 372 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 TNFSF8P32971 234 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 RPS19P39019 145 aaKnown RBP8.55□□□□□ -1.04
C11orf54-201ENST00000331239 OMPP47874 163 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 GIPRP48546 466 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 GFRA1P56159 465 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 CSNK2A1P68400 391 aaPredicted RBP8.55□□□□□ -1.04
C11orf54-201ENST00000331239 RUNX1T1Q06455 604 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 NDUFAF6Q330K2 333 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 FAM69AQ5T7M9 428 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 LIPKQ5VXJ0 399 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 GDPD3Q7L5L3 318 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 PHC2Q8IXK0 858 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 TEX47Q8TBZ9 253 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 SGTBQ96EQ0 304 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 ZNF582Q96NG8 517 aaPredicted RBP8.55□□□□□ -1.04
C11orf54-201ENST00000331239 GNRHR2Q96P88 292 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 SDHCQ99643 169 aaPredicted RBP8.55□□□□□ -1.04
C11orf54-201ENST00000331239 GPA33Q99795 319 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 BARHL1Q9BZE3 327 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 TIGARQ9NQ88 270 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 ANKRD10Q9NXR5 420 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 SSR3Q9UNL2 185 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 ZNF337Q9Y3M9 751 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 PTPRQQ9UMZ3 2332 aa8.55□□□□□ -1.04
C11orf54-201ENST00000331239 IDH3BO43837 385 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 AHSA1O95433 338 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 HOXD4P09016 255 aaPredicted RBP8.54□□□□□ -1.04
C11orf54-201ENST00000331239 RORCP51449 518 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 PRPS1P60891 318 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 LSM11P83369 360 aaKnown RBP eCLIP8.54□□□□□ -1.04
C11orf54-201ENST00000331239 HOXC5Q00444 222 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 CDK5Q00535 292 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 ZP4Q12836 540 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 FOXF1Q12946 379 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 SNAPC1Q16533 368 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 SMUG1Q53HV7 270 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 C1orf140Q5VVS0 124 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 ACSM5Q6NUN0 579 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 ARSKQ6UWY0 536 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 ESPNLQ6ZVH7 1005 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.54□□□□□ -1.04
C11orf54-201ENST00000331239 NKAIN4Q8IVV8 208 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 TMEM251Q8N6I4 163 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 BPIFA2Q96DR5 249 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 TEX12Q9BXU0 123 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 PLA2G12AQ9BZM1 189 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 SNTG1Q9NSN8 517 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 C14orf119Q9NWQ9 140 aa8.54□□□□□ -1.04
C11orf54-201ENST00000331239 ERVK13-1Q9NX77 482 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms