RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 HIST1H2ACQ93077 130 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 NXF5Q9H1B4 397 aaKnown RBP12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 SYT4Q9H2B2 425 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 CLEC4MQ9H2X3 399 aaPredicted RBP12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 KLHL9Q9P2J3 617 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 PPIEQ9UNP9 301 aaKnown RBP12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 ANXA2P2A6NMY6 339 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 ARPC3O15145 178 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 PEX14O75381 377 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 ANXA2P07355 339 aaKnown RBP12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 TACSTD2P09758 323 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 GGTLC2Q14390 218 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 PRAMEF17Q5VTA0 474 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 LRRC69Q6ZNQ3 347 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 WDR76Q9H967 626 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 ANKRD10Q9NXR5 420 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 ZNF69Q9UC07 566 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 OR5V1Q9UGF6 321 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 MEIS3P1A6NDR6 274 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 HCRTR2O43614 444 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 PSMB1P20618 241 aaKnown RBP12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 CDK2P24941 298 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 TACR3P29371 465 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 RAD52P43351 418 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 ZNF74Q16587 644 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 PRTGQ2VWP7 1150 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 WBP2NLQ6ICG8 309 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 STAC2Q6ZMT1 411 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 FTMTQ8N4E7 242 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 ZNF524Q96C55 264 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 LPAR4Q99677 370 aa12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.79□□□□□ -0.367e-6■■■■□ 19.6
ATP2C1-201ENST00000328560 MRM2Q9UI43 246 aaKnown RBP12.79□□□□□ -0.36
ATP2C1-201ENST00000328560 CNTRLQ7Z7A1 2325 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 RPL18Q07020 188 aaKnown RBP12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 CAMK2BQ13554 666 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 ELOCQ15369 112 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 C1QL3Q5VWW1 255 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 NKAIN2Q5VXU1 208 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 TEX261Q6UWH6 196 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 TTLL10Q6ZVT0 673 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 SLC35D2Q76EJ3 337 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 OR51A4Q8NGJ6 313 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 LRRC61Q9BV99 259 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 UBQLN4Q9NRR5 601 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 FRRS1LQ9P0K9 344 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 RABL2BQ9UNT1 228 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 U3KQ87 197 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 C2CD4DB7Z1M9 353 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 H0YC42 278 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 SRPX2O60687 465 aaPredicted RBP12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 SLC22A5O76082 557 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 PROS1P07225 676 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 ANXA7P20073 488 aaKnown RBP12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 BLVRAP53004 296 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 SLC35D3Q5M8T2 416 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 MEIOBQ8N635 442 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 OR11G2Q8NGC1 345 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 DLL4Q9NR61 685 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 UTS2O95399 124 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 RAF1P04049 648 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 HRGP04196 525 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 DPP4P27487 766 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 ART1P52961 327 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 TSPAN5P62079 268 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 LTBQ06643 244 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 PLA2G7Q13093 441 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 CAMK2DQ13557 499 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 ALKBH1Q13686 389 aaKnown RBP12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 LGALSLQ3ZCW2 172 aaPredicted RBP12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 BAIAP2L2Q6UXY1 529 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 TSLPQ969D9 159 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 DDOQ99489 341 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 NMNAT2Q9BZQ4 307 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 NOX3Q9HBY0 568 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 MGAT4CQ9UBM8 478 aa12.78□□□□□ -0.36
ATP2C1-201ENST00000328560 SDC3O75056 442 aa12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 AKR7A3O95154 331 aa12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 CCR5P51681 352 aa12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 DYRK1AQ13627 763 aa12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 Q499Y3 187 aa12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 KLHL26Q53HC5 615 aa12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 YOD1Q5VVQ6 348 aaPredicted RBP12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 PWWP2BQ6NUJ5 590 aa12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 UNQ9370/PRO34162Q6UXP9 181 aa12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 OR6V1Q8N148 313 aa12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 SLC43A2Q8N370 569 aa12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 HOXB13Q92826 284 aaPredicted RBP12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 TMEM106AQ96A25 262 aa12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 MMP25Q9NPA2 562 aa12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 PRODH2Q9UF12 536 aa12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 CDV3Q9UKY7 258 aaKnown RBP12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 CLDN16Q9Y5I7 305 aa12.77□□□□□ -0.36
ATP2C1-201ENST00000328560 MYO15AQ9UKN7 3530 aa12.77□□□□□ -0.37
ATP2C1-201ENST00000328560 TRAV8-7A0A075B6U6 113 aa12.77□□□□□ -0.37
ATP2C1-201ENST00000328560 ZNF264O43296 627 aa12.77□□□□□ -0.37
ATP2C1-201ENST00000328560 DOK2O60496 412 aa12.77□□□□□ -0.37
ATP2C1-201ENST00000328560 ADRA2CP18825 462 aa12.77□□□□□ -0.37
ATP2C1-201ENST00000328560 CD1CP29017 333 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms