RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 FARSAQ9Y285 508 aaKnown RBP11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 KIAA1549LQ6ZVL6 1849 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 TRAV1-2A0A0B4J238 106 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 C17orf51A8MQB3 221 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 C17orf105B2RV13 164 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 AIPO00170 330 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 EIF1AYO14602 144 aaKnown RBP11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 RENP00797 406 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 TPOP07202 933 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 ENPP1P22413 925 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 CXCR1P25024 350 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 OR1D4P47884 311 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 ARFIP1P53367 373 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 RPS15P62841 145 aaKnown RBP11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 SCGB2B2Q4G0G5 96 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 DPY19L2P2Q6ZN68 376 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 ZNF227Q86WZ6 799 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 SLC35F3Q8IY50 421 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 SLC2A12Q8TD20 617 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 SFXN2Q96NB2 322 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 ATXN7L1Q9ULK2 861 aaPredicted RBP11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 A0A1W2PQF6 199 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 LYPD3O95274 346 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 ECDO95905 644 aaPredicted RBP11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 C4BPBP20851 252 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 MAP3K8P41279 467 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 EIF1AXP47813 144 aaKnown RBP11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 CAMK2DQ13557 499 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 COL28A1Q2UY09 1125 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 ZCCHC12Q6PEW1 402 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 TTLL10Q6ZVT0 673 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 SYS1Q8N2H4 156 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 KDM8Q8N371 416 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 JAGN1Q8N5M9 183 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 BCORP1Q8N888 145 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 NPEPL1Q8NDH3 523 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 OR51A4Q8NGJ6 313 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 TM4SF19Q96DZ7 209 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 ATG5Q9H1Y0 275 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 WDR76Q9H967 626 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 OR5V1Q9UGF6 321 aa11.77□□□□□ -0.53
HMGCS1-201ENST00000325110 DCTN6O00399 190 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 GOSR2O14653 212 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 GPRIN2O60269 458 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 KDM4BO94953 1096 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 CD53P19397 219 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 SLC2A5P22732 501 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 FAUP35544 74 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 FNTBP49356 437 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 CBFBQ13951 182 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 OR7E24Q6IFN5 339 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 NPSR1Q6W5P4 371 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 STAC2Q6ZMT1 411 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 MAMSTRQ6ZN01 415 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 OVCH1Q7RTY7 1134 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 OR14A16Q8NHC5 309 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 TPSD1Q9BZJ3 242 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 CA10Q9NS85 328 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 KLHDC2Q9Y2U9 406 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 TRIOO75962 3097 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 A0A1W2PPL8 197 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 DCDC2BA2VCK2 349 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 OIP5O43482 229 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 SDC3O75056 442 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 GLCEO94923 617 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 TAS2R20P59543 309 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 PRPS1P60891 318 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 KLF9Q13886 244 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 SMAD2Q15796 467 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 Q499Y3 187 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 SMUG1Q53HV7 270 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 SHISA6Q6ZSJ9 500 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 GLB1L2Q8IW92 636 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 PM20D2Q8IYS1 436 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 BMPERQ8N8U9 685 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 PLPP7Q8NBV4 271 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 GALNT11Q8NCW6 608 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 THAP3Q8WTV1 239 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 C3orf49Q96BT1 292 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 WDR89Q96FK6 387 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 TRPV4Q9HBA0 871 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 SPEGQ15772 3267 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 MEIKINA0A087WXM9 373 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 GABARAPH6UMI1 98 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 ACOT7O00154 380 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 OGG1O15527 345 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 CDC40O60508 579 aaKnown RBP eCLIP11.76□□□□□ -0.535e-9■□□□□ 8.6
HMGCS1-201ENST00000325110 SPDEFO95238 335 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 SMIM10L1P0DMW3 83 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 TACR3P29371 465 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 P2RX1P51575 399 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 CDONQ4KMG0 1287 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 BAIAP2L2Q6UXY1 529 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 OR11G2Q8NGC1 345 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 SMIM10Q96HG1 83 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 PDCD10Q9BUL8 212 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 B3GNT4Q9C0J1 378 aa11.76□□□□□ -0.53
HMGCS1-201ENST00000325110 MPC2O95563 127 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 CD14P08571 375 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 UBL4AP11441 157 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms