RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 INMT-MINDY4F8WBC2 141 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 TSPAN4O14817 238 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 CELA2BP08218 269 aaPredicted RBP12.41□□□□□ -0.42
RFFL-201ENST00000315249 DEFA5Q01523 94 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 IL11RAQ14626 422 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 TP53I13Q8NBR0 393 aaPredicted RBP12.41□□□□□ -0.42
RFFL-201ENST00000315249 OR1S1Q8NH92 325 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 SORCS2Q96PQ0 1159 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 IGHV5-51A0A0C4DH38 117 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 TMPRSS11DO60235 418 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 DPM1O60762 260 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 DNAJB5O75953 348 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 KCNK2O95069 426 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 IFNA17P01571 189 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 OR8G1Q15617 311 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 NTRK2Q16620 822 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 HAGHLQ6PII5 290 aaPredicted RBP12.41□□□□□ -0.42
RFFL-201ENST00000315249 GSG1LQ6UXU4 331 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.41□□□□□ -0.42
RFFL-201ENST00000315249 ADGRG5Q8IZF4 528 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 ZNF587Q96SQ5 575 aaPredicted RBP12.41□□□□□ -0.42
RFFL-201ENST00000315249 TMEM9Q9P0T7 183 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 SNAPC5O75971 98 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 MAP2K3P46734 347 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 RPL34P49207 117 aaKnown RBP12.41□□□□□ -0.42
RFFL-201ENST00000315249 ZXDAP98168 799 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 ALKBH6Q3KRA9 238 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 CCDC58Q4VC31 144 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 SGPP2Q8IWX5 399 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 SLC35F3Q8IY50 421 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 METTL9Q9H1A3 318 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 FUOMA2VDF0 154 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 SLC22A20A6NK97 555 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 PIP5K1CO60331 668 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 CISD3P0C7P0 127 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 CLDN15P56746 228 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 PRAMEF9Q5VWM5 478 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 GJC3Q8NFK1 279 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 HAVCR2Q8TDQ0 301 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 STEAP1Q9UHE8 339 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 V9GY05 133 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 M0R082 166 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 CXCL13O43927 109 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 EIF4E2O60573 245 aaKnown RBP12.4□□□□□ -0.42
RFFL-201ENST00000315249 TUSC2O75896 110 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 DRD5P21918 477 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 PTGER4P35408 488 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 ZNF45Q02386 682 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 OR7G2Q8NG99 324 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 CMSS1Q9BQ75 279 aaKnown RBP12.4□□□□□ -0.42
RFFL-201ENST00000315249 AGAP5A6NIR3 686 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 FAM157BP0CG42 384 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 BMP2P12643 396 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 KEAP1Q14145 624 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 GK3PQ14409 553 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 FBXW12Q6X9E4 464 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 OR6V1Q8N148 313 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 CPEB3Q8NE35 698 aaKnown RBP12.4□□□□□ -0.42
RFFL-201ENST00000315249 SDF2Q99470 211 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 P4HTMQ9NXG6 502 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 EFSO43281 561 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 MSR1P21757 451 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 EPHA8P29322 1005 aaPredicted RBP12.4□□□□□ -0.42
RFFL-201ENST00000315249 RAB40BQ12829 278 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 FKRPQ9H9S5 495 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 B3GAT1Q9P2W7 334 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 FBXL4Q9UKA2 621 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 C5orf67F2Z3F1 127 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 MYF6P23409 242 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 CDK2P24941 298 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 TRA2AQ13595 282 aaKnown RBP eCLIP12.4□□□□□ -0.42
RFFL-201ENST00000315249 STEAP2Q8NFT2 490 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 FUNDC2Q9BWH2 189 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 OR11A1Q9GZK7 315 aa12.4□□□□□ -0.42
RFFL-201ENST00000315249 TRGV5A0A0B4J1U4 118 aa12.4□□□□□ -0.43
RFFL-201ENST00000315249 HMX3A6NHT5 357 aa12.4□□□□□ -0.43
RFFL-201ENST00000315249 SLC2A1P11166 492 aa12.4□□□□□ -0.43
RFFL-201ENST00000315249 RNF4P78317 190 aa12.4□□□□□ -0.43
RFFL-201ENST00000315249 HSF1Q00613 529 aa12.4□□□□□ -0.43
RFFL-201ENST00000315249 SIMC1Q8NDZ2 872 aa12.4□□□□□ -0.43
RFFL-201ENST00000315249 QPCTLQ9NXS2 382 aa12.4□□□□□ -0.43
RFFL-201ENST00000315249 FZD7O75084 574 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 TSPAN12O95859 305 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 GPR157Q5UAW9 335 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 ANKRD16Q6P6B7 361 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 DCXRQ7Z4W1 244 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 CD163Q86VB7 1156 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 DEFB108BQ8NET1 73 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 NUDT8Q8WV74 236 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 WDR76Q9H967 626 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 LSM5Q9Y4Y9 91 aaKnown RBP12.39□□□□□ -0.43
RFFL-201ENST00000315249 D6RAR5 112 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 P2RY10O00398 339 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 CRYAAP02489 173 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 ROBO4Q8WZ75 1007 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 CREB3L1Q96BA8 519 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 SDSLQ96GA7 329 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 HRASLS5Q96KN8 279 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 PHB2Q99623 299 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 FAIMQ9NVQ4 179 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms