RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SLCO1C1Q9NYB5 712 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 DBIP07108 87 aaKnown RBP13.35□□□□□ -0.27
PTPN9-201ENST00000306726 CTSEP14091 401 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 LUMP51884 338 aaPredicted RBP13.35□□□□□ -0.27
PTPN9-201ENST00000306726 SLC36A2Q495M3 483 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 TMEM196Q5HYL7 178 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 KIAA1211LQ6NV74 962 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 RNF165Q6ZSG1 346 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 MARCH3Q86UD3 253 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 OR4S1Q8NGB4 309 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 RXFP3Q9NSD7 469 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 NCDNQ9UBB6 729 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 ZMIZ1Q9ULJ6 1067 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 ERVK-19Q9WJR5 959 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 COLEC10Q9Y6Z7 277 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 COL4A2P08572 1712 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 H0YGG7 62 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 SPINT1O43278 529 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 CXCL2P19875 107 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 MAOAP21397 527 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 ARF3P61204 181 aaPredicted RBP13.35□□□□□ -0.27
PTPN9-201ENST00000306726 ZNF169Q14929 603 aaPredicted RBP13.35□□□□□ -0.27
PTPN9-201ENST00000306726 C2orf68Q2NKX9 166 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 OR5AK2Q8NH90 309 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 KIAA1143Q96AT1 154 aaPredicted RBP13.35□□□□□ -0.27
PTPN9-201ENST00000306726 RPP25Q9BUL9 199 aaKnown RBP13.35□□□□□ -0.27
PTPN9-201ENST00000306726 LYARQ9NX58 379 aaKnown RBP13.35□□□□□ -0.27
PTPN9-201ENST00000306726 COPZ2Q9P299 210 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 PCDHGA5Q9Y5G8 931 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 KIF26BQ2KJY2 2108 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 DISC1C4P0D8 188 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 CD3DP04234 171 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 IL9P15248 144 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 C4BPBP20851 252 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 PXNP49023 591 aaPredicted RBP13.34□□□□□ -0.27
PTPN9-201ENST00000306726 BTG2P78543 158 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 LTBQ06643 244 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 COL28A1Q2UY09 1125 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 SLC22A10Q63ZE4 541 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 ATRAIDQ6UW56 229 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 SEZ6L2Q6UXD5 910 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 NRSN1Q8IZ57 195 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 ZNF619Q8N2I2 560 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 TMIEQ8NEW7 156 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 TSNAXQ99598 290 aaKnown RBP13.34□□□□□ -0.27
PTPN9-201ENST00000306726 C1QTNF7Q9BXJ2 289 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 GPR34Q9UPC5 381 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 TCF20Q9UGU0 1960 aaKnown RBP13.34□□□□□ -0.27
PTPN9-201ENST00000306726 HCRTR2O43614 444 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 SERPINA3P01011 423 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 NDUFS1P28331 727 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 AP3S2P59780 193 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 CDNFQ49AH0 187 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 DCAF12L2Q5VW00 463 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 CD276Q5ZPR3 534 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 IDO2Q6ZQW0 420 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 BTN2A1Q7KYR7 527 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 PDZD9Q8IXQ8 264 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 OR10K1Q8NGX5 313 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 OR4C3Q8NH37 302 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 ATOH1Q92858 354 aaPredicted RBP13.34□□□□□ -0.27
PTPN9-201ENST00000306726 MED18Q9BUE0 208 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 ADGRL4Q9HBW9 690 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 EMC7Q9NPA0 242 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 KCNE5Q9UJ90 142 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 RNGTTO60942 597 aaKnown RBP13.34□□□□□ -0.27
PTPN9-201ENST00000306726 GAS1P54826 345 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 NRG3P56975 720 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 ZP1P60852 638 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 FAM53BQ14153 422 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 EXOSC6Q5RKV6 272 aaKnown RBP13.34□□□□□ -0.27
PTPN9-201ENST00000306726 KIRREL2Q6UWL6 708 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 MDGA2Q7Z553 956 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 PMM1Q92871 262 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 MMABQ96EY8 250 aaPredicted RBP13.34□□□□□ -0.27
PTPN9-201ENST00000306726 ALG12Q9BV10 488 aa13.34□□□□□ -0.27
PTPN9-201ENST00000306726 MDC1Q14676 2089 aaKnown RBP13.34□□□□□ -0.27
PTPN9-201ENST00000306726 COL4A3Q01955 1670 aa13.33□□□□□ -0.27
PTPN9-201ENST00000306726 hCG_1807616A0A1W2PRN6 198 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 OR6C68A6NDL8 312 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 DCNP07585 359 aaKnown RBP13.33□□□□□ -0.28
PTPN9-201ENST00000306726 TEKQ02763 1124 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 TMEM205Q6UW68 189 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 ZNF546Q86UE3 836 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 TTLQ8NG68 377 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 PAQR8Q8TEZ7 354 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 FAM3CQ92520 227 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 GRHPRQ9UBQ7 328 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 ACSL5Q9ULC5 683 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 SIGLEC7Q9Y286 467 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 VPS13AQ96RL7 3174 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 NDUFB2O95178 105 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 BTCP35070 178 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 EFNB2P52799 333 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 METTL11BQ5VVY1 283 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 VOPP1Q96AW1 172 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 ZNF75AQ96N20 296 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 ADOQ96SZ5 270 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 XKRYO14609 159 aa13.33□□□□□ -0.28
PTPN9-201ENST00000306726 ATG12O94817 140 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms