RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 RIMS4Q9H426 269 aaPredicted RBP12.49□□□□□ -0.41
TRIM56-201ENST00000306085 PIRO00625 290 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 POU3F1Q03052 451 aaPredicted RBP12.49□□□□□ -0.41
TRIM56-201ENST00000306085 GPR119Q8TDV5 335 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 HEXAP06865 529 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 AREGP15514 252 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 GABRA5P31644 462 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 RAB40BQ12829 278 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 B3GNT9Q6UX72 402 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 TMPRSS11FQ6ZWK6 438 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 MFSD9Q8NBP5 474 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 RPUSD4Q96CM3 377 aaKnown RBP12.49□□□□□ -0.41
TRIM56-201ENST00000306085 SUSD3Q96L08 255 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 ALOXE3Q9BYJ1 711 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 MED20Q9H944 212 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 SDHDO14521 159 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 VNN1O95497 513 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 RPL24P83731 157 aaKnown RBP12.48□□□□□ -0.41
TRIM56-201ENST00000306085 OR10J5Q8NHC4 309 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 KIAA1456Q9P272 454 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 FER1L5A0AVI2 2057 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 LRRC30A6NM36 301 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 FABP7O15540 132 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 SPINT2O43291 252 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 HBQ1P09105 142 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 BLVRBP30043 206 aaPredicted RBP12.48□□□□□ -0.41
TRIM56-201ENST00000306085 CLDN12P56749 244 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 OR4D1Q15615 310 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 LAX1Q8IWV1 398 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 GPR32P1Q8NGA4 272 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 S100A11P31949 105 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 C18orf21Q32NC0 220 aaPredicted RBP12.48□□□□□ -0.41
TRIM56-201ENST00000306085 SLC35E1Q96K37 410 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 SETBP1Q9Y6X0 1596 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 FAM183AA6NL82 134 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 CCR6P51684 374 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 LCN6P62502 163 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 CABLES2Q9BTV7 478 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 TRAV34A0A0B4J273 112 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 GPLD1P80108 840 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 RBPJQ06330 500 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 SEC22CQ9BRL7 303 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 UBQLN4Q9NRR5 601 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 OR1A1Q9P1Q5 309 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 FKBP1AP62942 108 aaKnown RBP12.48□□□□□ -0.41
TRIM56-201ENST00000306085 MARCH8Q5T0T0 291 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 PNPLA1Q8N8W4 532 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 OR13D1Q8NGV5 346 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 NECAP2Q9NVZ3 263 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 HRH3Q9Y5N1 445 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 WNT7AO00755 349 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 PDGFAP04085 211 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 PROZP22891 400 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 NR0B2Q15466 257 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 TECRLQ5HYJ1 363 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 GGHQ92820 318 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 INSL6Q9Y581 213 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 PMCHP20382 165 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 IAH1Q2TAA2 248 aaPredicted RBP12.48□□□□□ -0.41
TRIM56-201ENST00000306085 WDR5BQ86VZ2 330 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 SEMA4GQ9NTN9 838 aa12.48□□□□□ -0.41
TRIM56-201ENST00000306085 M0QYG6 137 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 OR51A4Q8NGJ6 313 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 OR51A2Q8NGJ7 313 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 TECTBQ96PL2 329 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 SLC6A20Q9NP91 592 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 LGI1O95970 557 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 MMP2P08253 660 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 OR5G3P0C626 314 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 KIAA1024LP59773 190 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 GALNT2Q10471 571 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 ZNF154Q13106 437 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 KEAP1Q14145 624 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 LYRM7Q5U5X0 104 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 MDGA2Q7Z553 956 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 L3MBTL4Q8NA19 623 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 TMEM212A6NML5 194 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 SNRPBP14678 240 aaKnown RBP12.47□□□□□ -0.41
TRIM56-201ENST00000306085 TPPP2P59282 170 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 TOMM20LQ6UXN7 152 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 C17orf107Q6ZR85 190 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 NAGSQ8N159 534 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 SLC5A12Q1EHB4 618 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 AP5S1Q9NUS5 200 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 VWDEQ8N2E2 1590 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 ADRB1P08588 477 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 NDUFB7P17568 137 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 PGGT1BP53609 377 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 CLDN8P56748 225 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 DCAF4L2Q8NA75 395 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 SLC35B2Q8TB61 432 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 SLC35A3Q9Y2D2 325 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 NRXN1Q9ULB1 1477 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 DHRS7BQ6IAN0 325 aaPredicted RBP12.47□□□□□ -0.41
TRIM56-201ENST00000306085 RFPL4AA6NLU0 287 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 RFPL4AL1F8VTS6 287 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 CD1BP29016 333 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 HOXC5Q00444 222 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 LCN8Q6JVE9 175 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 ZNF775Q96BV0 537 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms